| SAG Strain Number: | 1050-3 |
| TAXONOMY |
| Genus: | Navicula |
| Species: | pelliculosa |
| Taxonomic position: | Heterokontophyta - Bacillariophyceae |
| Authority: | (de Brébisson) Hilse |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Heterokontophyta |
| Class: | Bacillariophyceae |
| Common name: | Diatoms |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | |
| Continent: | America |
| Country: | USA |
| Locality: | Connecticut, New Haven Green |
| Lat. / Long. (Precision): | 41.313532 / -72.927504 (10000m) View on Google Maps |
| Year: | 1950 |
| Isolated by: | J. C. Lewin |
| Strain number by isolator: | |
| Deposition by: | E. G. Pringsheim |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | Diat Ag |
| Axenic: | no |
| Strain relatives: | |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; no axenic cultures available. SAG 07/2018; taxonomy unclear, Navicula pelliculosa (de Brébisson) Hilse is synonym of Fistulifera pelliculosa (Brebisson) Lange-Bertalot (1997), but in 18S tree of Matsumoto et al. (2014) SAG 1050-3 assembles with genus Mayamaea and clear distance to F. saprophila. SAG 03/2018 |
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| PUBLICATIONS |
| Publication: | Joonas E. et al. (2021) Biodiversity and functional trait effects on copper toxicity in a proof-of-concept multispecies microalgal assay. Algal Res. 55:102204 |
| Publication: | Matsumoto, Mitsufumi et al. (2014) Morphological and molecular phylogenetic analysis of the high triglyceride-producing marine diatom, Fistulifera solarissp. nov. (Bacillariophyceae). Phycological Research 62 (4):257-268 |
| Publication: | Stockenreiter, M. et al. (2013) Functional group richness: implications of biodiversity for light use and lipid yield in microalgae. J. Phycol. 49 (5):838-847 |
| Publication: | Stockenreiter M. et al. (2012) The effect of species diversity on lipid production by micro-algal communities. J. Appl. Phycol. 24:45-54 |
| Publication: | Epp, L. S. et al. (2011) Molecular profiling of diatom assemblages in tropical lake sediments using taxon-specific PCR and Denaturing High-Performance Liquid Chromatography (PCR-DHPLC). Mol Ecol Resour 11 (5):842-53 |
| Publication: | Lang I. et al. (2011) Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection. BMC Plant Biol 11:124 |
| Publication: | Behnke, A. et al. (2004) Reproductive compatability and rDNA sequence analyses in the Sellaphora pupula species complex (Bacillariophyta). J. Phycol. 40:193-208 |
| Publication: | Lewin, J.C. (1955) The capsule of the diatom Navicula pelliculosa. J. gen. Microbiol. 13 (1):162-169 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | DQ256055 Fistulifera pelliculosa strain SAG1050-3 silicon transporter (SIT5) gene, partial cds. (1018 bp) |
| Sequence Accession: | DQ256053 Fistulifera pelliculosa strain SAG1050-3 silicon transporter (SIT3) gene, partial cds. (1048 bp) |
| Sequence Accession: | DQ256051 Fistulifera pelliculosa strain SAG1050-3 silicon transporter (SIT1) gene, partial cds. (1019 bp) |
| Sequence Accession: | DQ256056 Fistulifera pelliculosa strain SAG1050-3 silicon transporter (SIT6) gene, partial cds. (979 bp) |
| Sequence Accession: | DQ256054 Fistulifera pelliculosa strain SAG1050-3 silicon transporter (SIT4) gene, partial cds. (1074 bp) |
| Sequence Accession: | DQ256052 Fistulifera pelliculosa strain SAG1050-3 silicon transporter (SIT2) gene, partial cds. (1019 bp) |
| Sequence Accession: | KU948216 Fistulifera pelliculosa isolate EPSAG 1050-3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence (576 bp) |
| Sequence Accession: | AJ544657 18S rRNA gene and ITS1 (1781 bp) |
| Sequence Accession: | FJ012351 Navicula pelliculosa isolate SAG1050-3 18S ribosomal RNA gene, partial sequence. (125 bp) |
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| CRYO |
| Cryopreservation: | good survival, standard 2-step protocol 5% DMSO |
| TEACHING |
| Recommended for teaching: | yes |
