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SAG 12.87 Chlamydomonas subcaudata

SAG Strain Number:12.87
TAXONOMY
Genus:Chlamydomonas
Species:subcaudata
Taxonomic position:Chlorophyta - Chlorophyceae
Authority:Wille
Variety:
Formerly called:C. pulsatilla
Authentic:no
Division:Chlorophyta
Class:Chlorophyceae
Common name:Green Algae - Chlorophytes
ORIGIN
General habitat:freshwater
Climatic zone:
Continent:Asia
Country:Japan
Locality:Muroran, Hokkaido
Lat. / Long.  (Precision):42.363618 / 140.983315  (10000m)   View on Google Maps
Year:May 1966
Isolated by:T. Ichimura
Strain number by isolator:1966-05
Deposition by:M.M. Watanabe (NIES) as NIES 122
Deposition date:05.1986
CULTURE INFORMATION
Culture medium:MiEg1/2:1/2
Axenic:bacterial or other types of contamination
Strain relatives:NIES-122
Agitation resistance:yes
Special properties:NO known Nagoya Protocol restrictions for this strain;
 
PUBLICATIONS
Publication:Odom O.W. et al. (2013) Reverse Transcription of Spliced psbA mRNA in Chlamydomonas spp. and Its Possible Role in Evolutionary Intron Loss. Mol. Biol. Evol. 30 (12):2666-2675
Publication:Odom O.W. et al. (2010) AN UNPRECEDENTED GROUP‐II INTRON FROM CHLAMYDOMONAS SUBCAUDATA (CHLOROPHYCEAE) THAT HAS TWO LARGE OPEN READING FRAMES—POTENTIALLY ENCODING A REVERSE TRANSCRIPTASE‐MATURASE‐ENDONUCLEASE AND A NOVEL PROTEIN. J. Phycol. 46:969-973
SEQUENCE INFORMATION
Sequence Accession:GQ871929  Chlamydomonas subcaudata strain SAG 12.87 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; plastid.  (660 bp)
Sequence Accession:GQ868651  Chlamydomonas subcaudata PsbA (psbA) gene, intron and partial cds; reverse transcriptase-maturase-endonuclease gene, partial cds; and unknown gene, complete cds; chloroplast.  (4514 bp)
Sequence Accession:AJ781310  Chlamydomonas subcaudata partial 18S rRNA gene, isolate SAG 12.87. (1767 bp)
Sequence Accession:JQ267358  Chlamydomonas subcaudata photosystem II core protein D1 (psbA), RT-Mat-En, and unknown genes, complete cds; chloroplast. (5452 bp)
Sequence Accession:JQ267356  Chlamydomonas subcaudata 23S ribosomal RNA gene, partial sequence; and LAGLDADG endonuclease gene, complete cds; chloroplast. (1084 bp)
CRYO
Cryopreservation:not detected
TEACHING
Recommended for teaching:no