| SAG Strain Number: | 1224-42 |
| TAXONOMY |
| Genus: | Discoplastis |
| Species: | spathirhyncha |
| Taxonomic position: | Euglenophyta - Euglenophyceae |
| Authority: | (Skuja) Triemer |
| Variety: | |
| Formerly called: | Euglena spatirhyncha (Ehrenberg) Skuja |
| Authentic: | no |
| Division: | Euglenophyta |
| Class: | Euglenophyceae |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Germany |
| Locality: | Bad Driburg, pond |
| Lat. / Long. (Precision): | 51.72965 / 9.022479 (100m) View on Google Maps |
| Year: | 1956 |
| Isolated by: | E. G. Pringsheim |
| Strain number by isolator: | |
| Deposition by: | E.G. Pringsheim (SAG) |
| Deposition date: | 1956 |
| CULTURE INFORMATION |
| Culture medium: | NH4E |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Łukomska-Kowalczyk M. et al. (2021) Description of Flexiglena gen. nov. and new members of Discoplastis and Euglenaformis (Euglenida). J. Phycol. 57 (3):766-779 |
| Publication: | Karnkowska, A. et al. (2018) Dynamic evolution of inverted repeats in Euglenophyta plastid genomes. Sci. Rep. 8:16071 |
| Publication: | Lakey, B. et al. (2017) The tetrapyrrole synthesis pathway as a model of horizontal gene transfer in euglenoids. J Phycol 53 (1):198–217 |
| Publication: | Bennett M.S. et al. (2015) Chloroplast Genome Evolution in the Euglenaceae. J. Eukaryot. Microbiol. 62 (6):773-785 |
| Publication: | Kim,J.I. et al. (2015) Taxon-rich multigene phylogeny of photosynthetic euglenoids (Euglenophyceae). Frontiers in Ecology and Evolution 3 |
| Publication: | Kim J.I. et al. (2014) Molecular Phylogeny and Cryptic Diversity of the Genus Phacus (Phacaceae, Euglenophyceae) and the Descriptions of Seven New Species. J. Phycol. 50 (5):948-959 |
| Publication: | Milanowski R. et al. (2014) Distribution of Conventional and Nonconventional Introns in Tubulin (alpha and beta) Genes of Euglenids. Mol. Biol. Evol. 31 (3):584-593 |
| Publication: | Kim J.I. et al. (2010) Multigene Analyses of Photosynthetic Euglenoids and New Family, Phacaceae (Euglenales). J. Phycol. 46 (6):1278–1287 |
| Publication: | Linton E.W. et al. (2010) Reconstructing Euglenoid Evolutionary Relationships using Three Genes: NuclearSSU and LSU, and Chloroplast SSUrDNA Sequences and the Description of Euglenaria gen. nov. (Euglenophyta). Protist 161:603-619 |
| Publication: | Milanowski, R. et al. (2006) Phylogeny of photosynthetic Euglenophytes based on combined chloroplast and cytoplasmic SSU rDNA sequence analysis. J. Phycol. 42 (3):721-730 |
| Publication: | Kosmala, S. et al. (2005) PHYLOGENETIC AND TAXONOMIC POSITION OF LEPOCINCLIS FUSCA COMB. NOV. (=EUGLENA FUSCA) (EUGLENACEAE): MORPHOLOGICAL AND MOLECULAR JUSTIFICATION. J. Phycol. 41:1258-1267 |
| Publication: | Marin, B. et al. (2003) Phylogeny and taxonomic revision of plastid-containing Euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure. Protist 154 (1):99-145 |
| show more publications ... |
| SEQUENCE INFORMATION |
| Sequence Accession: | NC_039969 Discoplastis spathirhyncha voucher SAG 1224-42 chloroplast, complete genome. (83936 bp) |
| Sequence Accession: | MH898670 Discoplastis spathirhyncha voucher SAG 1224-42 chloroplast, complete genome. (83936 bp) |
| Sequence Accession: | AY626060 Discoplastis spathirhyncha strain SAG 1224-42 16S small subunit ribosomal RNA gene, partial sequence; chloroplast. (1395 bp) |
| Sequence Accession: | DQ140100 Discoplastis spathirhyncha strain SAG 1224-42 large subunit ribosomal RNA gene, partial sequence. (3245 bp) |
| Sequence Accession: | JQ398622 Discoplastis spathirhyncha strain SAG 1224-42 chloroplast oxygen-evolving enhancer protein 1 precursor (psbO) mRNA, partial cds; nuclear gene for chloroplast product. (716 bp) |
| Sequence Accession: | KU500789 Discoplastis spathirhyncha plastid uroporphyrinogen decarboxylase isoform 3 mRNA, partial cds; nuclear gene for plastid product. (1314 bp) |
| Sequence Accession: | KU500773 Discoplastis spathirhyncha plastid uroporphyrinogen decarboxylase isoform 2 mRNA, partial cds; nuclear gene for plastid product. (1347 bp) |
| Sequence Accession: | KU500758 Discoplastis spathirhyncha plastid uroporphyrinogen decarboxylase isoform 1 mRNA, partial cds; nuclear gene for plastid product. (1146 bp) |
| Sequence Accession: | KU500748 Discoplastis spathirhyncha plastid coproporphyrinogen oxidase isoform 2 mRNA, partial cds; nuclear gene for plastid product. (1347 bp) |
| Sequence Accession: | KU500715 Discoplastis spathirhyncha plastid coproporphyrinogen oxidase isoform 1 mRNA, partial cds; nuclear gene for plastid product. (1146 bp) |
| Sequence Accession: | KU500664 Discoplastis spathirhyncha plastid protoporphyrinogen oxidase mRNA, partial cds; nuclear gene for plastid product. (1761 bp) |
| Sequence Accession: | KU500649 Discoplastis spathirhyncha mitochondrial protoporphyrinogen oxidase mRNA, partial cds; nuclear gene for mitochondrial product. (1221 bp) |
| Sequence Accession: | KU375873 Discoplastis spathirhyncha plastid uroporphyrinogen synthase mRNA, partial cds; nuclear gene for plastid product. (1077 bp) |
| Sequence Accession: | KU375857 Discoplastis spathirhyncha plastid porphobilinogen synthase mRNA, partial cds; nuclear gene for plastid product. (1476 bp) |
| Sequence Accession: | KU375845 Discoplastis spathirhyncha cytosolic porphobilinogen synthase mRNA, partial cds. (468 bp) |
| Sequence Accession: | KU375827 Discoplastis spathirhyncha plastid porphobilinogen deaminase mRNA, partial cds; nuclear gene for plastid product. (1395 bp) |
| Sequence Accession: | KU375798 Discoplastis spathirhyncha plastid glutamyl tRNA reductase mRNA, partial cds; nuclear gene for plastid product. (1842 bp) |
| Sequence Accession: | KU375781 Discoplastis spathirhyncha plastid glutamate 1-semialdehyde 2,1-aminotransferase mRNA, partial cds; nuclear gene for plastid product. (1704 bp) |
| Sequence Accession: | KU355527 Discoplastis spathirhyncha cytosolic glutamyl tRNA synthetase mRNA, partial cds. (1035 bp) |
| Sequence Accession: | KU355499 Discoplastis spathirhyncha plastid glutamyl tRNA synthetase mRNA, partial cds; nuclear gene for plastid product. (1938 bp) |
| Sequence Accession: | KU609217 Discoplastis spathirhyncha strain SAG1224-42 cytochrome oxidase subunit I (cox1) gene, partial cds; mitochondrial. (327 bp) |
| Sequence Accession: | KT350558 Discoplastis spathirhyncha culture-collection SAG:122442 fructose 1,6-bisphosphatase mRNA, partial cds. (951 bp) |
| Sequence Accession: | KT350557 Discoplastis spathirhyncha plastid fructose 1,6-bisphosphatase isoform 1 mRNA, partial cds; nuclear gene for plastid product. (1629 bp) |
| Sequence Accession: | KT350556 Discoplastis spathirhyncha plastid fructose 1,6-bisphosphatase isoform 2 mRNA, partial cds; nuclear gene for plastid product. (1647 bp) |
| Sequence Accession: | KT714075 Discoplastis spathirhyncha culture-collection SAG:122442 plastid sedoheptulose-1,7-bisphosphatase mRNA, partial cds; nuclear gene for plastid product. (2313 bp) |
| Sequence Accession: | KT718648 Discoplastis spathirhyncha culture-collection SAG:122442 plastid triosephosphate isomerase mRNA, partial cds; nuclear gene for plastid product. (1089 bp) |
| Sequence Accession: | KT718625 Discoplastis spathirhyncha culture-collection SAG:122442 triosephosphate isomerase mRNA, partial cds. (765 bp) |
| Sequence Accession: | KT633537 Discoplastis spathirhyncha culture-collection SAG:122442 plastid ribose-5-phosphate isomerase mRNA, partial cds; nuclear gene for plastid product. (738 bp) |
| Sequence Accession: | KT591619 Discoplastis spathirhyncha culture-collection SAG:122442 plastid phosphoribulokinase mRNA, partial cds; nuclear gene for plastid product. (1398 bp) |
| Sequence Accession: | KT588871 Discoplastis spathirhyncha culture-collection SAG:122442 plastid glyceraldehyde 3-phosphate dehydrogenase mRNA, partial cds; nuclear gene for plastid product. (1392 bp) |
| Sequence Accession: | KT588838 Discoplastis spathirhyncha culture-collection SAG:122442 glyceraldehyde 3-phosphate dehydrogenase isoform 2 mRNA, partial cds. (1059 bp) |
| Sequence Accession: | KT588837 Discoplastis spathirhyncha culture-collection SAG:122442 glyceraldehyde 3-phosphate dehydrogenase isoform 1 mRNA, partial cds. (1092 bp) |
| Sequence Accession: | KJ158186 Discoplastis spathirhyncha strain SAG1224-42 large subunit ribosomal RNA gene, partial sequence. (929 bp) |
| Sequence Accession: | AJ532454 partial 18S rRNA gene (2150 bp) |
| Sequence Accession: | KC907650 Discoplastis spathirhyncha strain SAG 1224-42 clone 4 alpha-tubulin (tubA) gene, partial cds. (1915 bp) |
| Sequence Accession: | KC907649 Discoplastis spathirhyncha strain SAG 1224-42 clone 2 alpha-tubulin (tubA) gene, partial cds. (1915 bp) |
| Sequence Accession: | KC907648 Discoplastis spathirhyncha strain SAG 1224-42 clone 1 alpha-tubulin (tubA) gene, partial cds. (1915 bp) |
| Sequence Accession: | KC907687 Discoplastis spathirhyncha strain SAG 1224-42 clone 2 beta-tubulin (tubB) gene, partial cds. (1249 bp) |
| Sequence Accession: | KC907686 Discoplastis spathirhyncha strain SAG 1224-42 clone 1 beta-tubulin (tubB) gene, partial cds. (1303 bp) |
| Sequence Accession: | JQ478714 UNVERIFIED: Discoplastis spathirhyncha strain SAG 1224-42 HSP90 (Hsp90) gene, partial sequence. (1919 bp) |
| Sequence Accession: | JQ478663 UNVERIFIED: Discoplastis spathirhyncha strain SAG 1224-42 psbO gene, complete sequence. (455 bp) |
| Sequence Accession: | JN984854 Discoplastis spathirhyncha elongation factor Tu (tufA) gene, partial cds; chloroplast. (1226 bp) |
| Sequence Accession: | EF525355 Discoplastis spathirhyncha strain SAG1224-42 large subunit ribosomal RNA gene, partial sequence; plastid. (1734 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | no |
