| SAG Strain Number: | 42.84 |
| TAXONOMY |
| Genus: | Pedinomonas |
| Species: | tuberculata |
| Taxonomic position: | Chlorophyta - Chlorophyceae |
| Authority: | (Vischer) Gams |
| Variety: | |
| Formerly called: | |
| Authentic: | yes |
| Division: | Chlorophyta |
| Class: | Chlorophyceae |
| Common name: | Green Algae - Chlorophytes |
| ORIGIN |
| General habitat: | soil |
| Climatic zone: | |
| Continent: | Europe |
| Country: | Switzerland |
| Locality: | Unterengadin, Natl. Park Munt la Schera, soil from 2300 m |
| Lat. / Long. (Precision): | |
| Year: | 1945 |
| Isolated by: | W. Vischer |
| Strain number by isolator: | 274 |
| Deposition by: | E.G. Pringsheim ( < W. Vischer) |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | MiEB12 |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | CCAP 1965/2; UTEX 1539 |
| Agitation resistance: | yes |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Lemieux C. et al. (2014) Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae. BMC Evol. Biol. 14:211 |
| Publication: | Marin B. (2012) Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae (Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded rRNA operons. Protist 163 (5):778-805 |
| Publication: | Schulze D. et al. (1987) Immunolocalization of a Ca2+ -modulated contractile protein in the flagellar apparatus of green algae: the nucleus-basal body connector. Eur J Cell Biol 45:51-61 |
| Publication: | Vischer, W. (1949) Pedinomonas Korschikoff und eine neue Flagellatenklasse, Opisthokonta. Verhandl. Internat. Ver. Theoret. Angew. Limnol. 10:504-510 |
| SEQUENCE INFORMATION |
| Sequencing Project: | PRJNA267413 Pedinomonas tuberculata culture-collection SAG:42.84 chloroplast, complete genome. |
| Sequence Accession: | KM020064 Pedinomonas tuberculata strain SAG 42.84 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence. (2324 bp) |
| Sequence Accession: | KM462867 Pedinomonas tuberculata culture-collection SAG:42.84 chloroplast, complete genome. (126694 bp) |
| Sequence Accession: | HE610134 Pedinomonas tuberculata 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 42.84. (5237 bp) |
| Sequence Accession: | HE610168 Pedinomonas tuberculata plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 42.84. (2665 bp) |
| CRYO |
| Cryopreservation: | no survival |
| TEACHING |
| Recommended for teaching: | no |
