| SAG Strain Number: | 933-7 |
| TAXONOMY |
| Genus: | Ochromonas |
| Species: | danica |
| Taxonomic position: | Heterokontophyta - Chrysophyceae |
| Authority: | Pringsheim |
| Variety: | |
| Formerly called: | |
| Authentic: | yes |
| Division: | Heterokontophyta |
| Class: | Chrysophyceae |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Denmark |
| Locality: | bog pool near Everdrup |
| Lat. / Long. (Precision): | 55.203341 / 11.94647 (1000m) View on Google Maps |
| Year: | 1954 |
| Isolated by: | E. G. Pringsheim |
| Strain number by isolator: | |
| Deposition by: | E.G. Pringsheim (SAG) |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | Ochr |
| Axenic: | axenic |
| Strain relatives: | CCAP 933/2B; UTEX 1298; ATCC 30004 [dec.] |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
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| PUBLICATIONS |
| Publication: | Van der Auwera, G. et al. (1997) Complete large subunit ribosomal RNA sequences from the heterokont algae Ochromonas danica, Nannochloropsis salina, and Tribonema aequale, and phylogenetic analysis. J. Mol. Evol. 45 (1):84-90 |
| Publication: | Witt D. et al. (1988) Disproving the hypothesis of a common ancestry for the Ochromonas danica chrysoplast and Heliobacterium chlorum. Arch. Microbiol. 150 (3):244-248 |
| Publication: | Häder D.-P. et al. (1981) Phototaxis in the flagellates, Euglena gracilis and Ochromonas danica. Arch. Mikrobiol. 130 (1):78-82 |
| Publication: | Herrmann V. et al. (1977) Excretion products of algae: Identification of biogenic amines by gas-liquid chromatography and mass spectrometry of their trifluoroacetamides. Analytical Chem. 78 (2):365-373 |
| Publication: | Jüttner F. et al. (1974) Excretion products of Ochromonas with special reference to pyrrolidone carboxylic acid. Arch. Microbiol. 96:223-232 |
| Publication: | Aaronson S. (1973) Particle aggregation and phagotrophy by Ochromonas. Arch. Mikrobiol. 92 (1):39-44 |
| Publication: | Aaronson S. et al. (1973) A note on the fine structure of the Ochromonas danica “tail”. Arch. Mikrobiol. 93 (4):359-362 |
| Publication: | Aaronson S. et al. (1971) Ultrastructure of Intracellular and Extracellular Vesicles, Membranes, and Myelin Figures Produced by Ochromonas danica. Journal of Ultrastructure Research 35 (5-6):418-430 |
| Publication: | Grusky G.E. et al. (1969) Cytochemical Changes in Aging Ochromonas; Evidence for an Alkaline Phosphatase. J. Protozool 16:686-689 |
| Publication: | Schnepf E. et al. (1968) Über das Vorkommen und den Bau gestielter “Hüllen” bei Ochromonas malhamensis Pringsheim O. sociabilis nom. prov. Pringsheim. Arch. Mikrobiol. 63 (1):15-25 |
| Publication: | Pringsheim E.G. (1955) Kleine Mitteilungen über Flagellaten und Algen. III. Über Ochromonas danica n. sp. und andere Arten der Gattung. Arch. Mikrobiol. 23 (2):181-192 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | GU935657 Ochromonas danica strain SAG 933.7 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (1071 bp) |
| Sequence Accession: | KM590836 Ochromonas danica strain SAG 933.7 photosystem I P700 chlorophyll a apoprotein A1 (psaA) gene, partial cds; plastid. (1581 bp) |
| Sequence Accession: | KM590767 Ochromonas danica strain SAG 933.7 23S ribosomal RNA gene, partial sequence; plastid. (3750 bp) |
| Sequence Accession: | Y07976 5.8S rRNA gene and ITS1 and ITS2 DNA (323 bp) |
| Sequence Accession: | Y07977 28S rRNA gene and ITS2 DNA (3263 bp) |
| Sequence Accession: | X53183 Ochromonas danica chrysoplast 16S rRNA (part.). (1300 bp) |
| Sequence Accession: | AJ251725 Ochromonas danica partial mRNA for putative proton-translocating inorganic pyrophosphatase (vppa gene). (579 bp) |
| Sequence Accession: | AJ512344 Ochromonas danica partial gapC1 gene for plastidic glyceraldehyde-3-phosphate dehydrogenase. (935 bp) |
| Sequence Accession: | AJ512345 Ochromonas danica partial gapC gene for cytosolic glyceraldehyde-3-phosphate dehydrogenase, exons 1 and 2. (1016 bp) |
| Sequence Accession: | JQ281514 Ochromonas danica strain SAG933.7 18S ribosomal RNA gene, partial sequence. (1725 bp) |
| Sequence Accession: | GU935636 Ochromonas danica strain SAG 933.7 28S ribosomal RNA gene, partial sequence. (2786 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | yes |
