| SAG Strain Number: | 10.88 |
| TAXONOMY |
| Genus: | Cryptoglena |
| Species: | skujae |
| Taxonomic position: | Euglenophyta - Euglenophyceae |
| Authority: | Kim, Triemer et Shin |
| Variety: | |
| Formerly called: | Phacus agilis Skuja |
| Authentic: | yes |
| Division: | Euglenophyta |
| Class: | Euglenophyceae |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Austria |
| Locality: | Neusiedler See at Rust |
| Lat. / Long. (Precision): | 47.803931 / 16.677132 (5000m) View on Google Maps |
| Year: | July 1983 |
| Isolated by: | E. Kusel-Fetzmann |
| Strain number by isolator: | 08 001 |
| Deposition by: | E. Kusel-Fetzmann |
| Deposition date: | 02.1986 |
| CULTURE INFORMATION |
| Culture medium: | NH4E |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Lakey, B. et al. (2017) The tetrapyrrole synthesis pathway as a model of horizontal gene transfer in euglenoids. J Phycol 53 (1):198–217 |
| Publication: | Bennett M.S. et al. (2015) Chloroplast Genome Evolution in the Euglenaceae. J. Eukaryot. Microbiol. 62 (6):773-785 |
| Publication: | Kim,J.I. et al. (2015) Taxon-rich multigene phylogeny of photosynthetic euglenoids (Euglenophyceae). Frontiers in Ecology and Evolution 3 |
| Publication: | Kim, J.I. et al. (2013) Cryptic speciation in the genus Cryptoglena (Euglenaceae) revealed by nuclear and plastid SSU and LSU rRNA gene. J. Phycol. 49 (1): 92–102 |
| Publication: | Kim, J.I. et al. (2012) Phylogenetic reappraisal of the genus Monomorphina (Euglenophyceae) based on molecular and morphological data. J. Phycol. 49 (1):82-91 |
| Publication: | Lang I. et al. (2011) Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection. BMC Plant Biol 11:124 |
| Publication: | Kim J.I. et al. (2010) Multigene Analyses of Photosynthetic Euglenoids and New Family, Phacaceae (Euglenales). J. Phycol. 46 (6):1278–1287 |
| Publication: | Linton E.W. et al. (2010) Reconstructing Euglenoid Evolutionary Relationships using Three Genes: NuclearSSU and LSU, and Chloroplast SSUrDNA Sequences and the Description of Euglenaria gen. nov. (Euglenophyta). Protist 161:603-619 |
| Publication: | Brosnan, S. et al. (2003) Phylogeny of the photosynthetic euglenophytes inferred from the nuclear SSU and partial LSU rDNA. Int. J. Syst. Evol. Microbiol. 53 (4):1175-1186 |
| Publication: | Marin, B. et al. (2003) Phylogeny and taxonomic revision of plastid-containing Euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure. Protist 154 (1):99-145 |
| Publication: | Nudelman, M.A. et al. (2003) Phylogeny of Euglenophyceae based on small subunit rDNA sequences: taxonomic implications. J. Phycol. 39 (1): 226-235 |
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| SEQUENCE INFORMATION |
| Sequencing Project: | PRJNA287375 Cryptoglena skujai RefSeq Genome |
| Sequence Accession: | JN603871 Cryptoglena skujai strain SAG10.88 26S large subunit ribosomal RNA gene, partial sequence. (977 bp) |
| Sequence Accession: | AY014998 Cryptoglena skujai strain SAG 10.88 18S small subunit ribosomal RNA gene, partial sequence. (2259 bp) |
| Sequence Accession: | AY130236 Cryptoglena skujai strain SAG 10.88 voucher Samml. Algenkultur. Gottingen (SAG) 10.88 large subunit ribosomal RNA gene, partial sequence. (3285 bp) |
| Sequence Accession: | JQ356797 Cryptoglena skujai strain SAG10.88 26S ribosomal RNA gene, partial sequence. (977 bp) |
| Sequence Accession: | JQ398621 Cryptoglena skujai strain SAG 10.88 chloroplast oxygen-evolving enhancer protein 1 precursor (psbO) mRNA, partial cds; nuclear gene for chloroplast product. (710 bp) |
| Sequence Accession: | KU500714 Cryptoglena skujai plastid coproporphyrinogen oxidase isoform 2 mRNA, partial cds; nuclear gene for plastid product. (1260 bp) |
| Sequence Accession: | KU500688 Cryptoglena skujai plastid coproporphyrinogen oxidase isoform 1 mRNA, partial cds; nuclear gene for plastid product. (1338 bp) |
| Sequence Accession: | KU355498 Cryptoglena skujai plastid glutamyl tRNA synthetase mRNA, partial cds; nuclear gene for plastid product. (954 bp) |
| Sequence Accession: | KU609216 Cryptoglena skujai strain SAG10.88 cytochrome oxidase subunit I (cox1) gene, partial cds; mitochondrial. (327 bp) |
| Sequence Accession: | KT731166 Cryptoglena skujai culture-collection SAG:1088 ribulose-1,5-bisphosphate carboxylase/oxygenase subunit mRNA, partial cds. (371 bp) |
| Sequence Accession: | KT588870 Cryptoglena skujai culture-collection SAG:1088 plastid glyceraldehyde 3-phosphate dehydrogenase mRNA, partial cds; nuclear gene for plastid product. (1155 bp) |
| Sequence Accession: | KT588835 Cryptoglena skujai culture-collection SAG:1088 glyceraldehyde 3-phosphate dehydrogenase mRNA, partial cds. (1056 bp) |
| Sequence Accession: | AJ532438 partial 18S rRNA gene (2167 bp) |
| Sequence Accession: | JQ478712 UNVERIFIED: Cryptoglena skujae strain SAG 10.88 HSP90 (Hsp90) gene, partial sequence. (1884 bp) |
| Sequence Accession: | JQ478660 UNVERIFIED: Cryptoglena skujae strain SAG 10.88 psbO gene, complete sequence. (454 bp) |
| Sequence Accession: | JN984863 Cryptoglena skujae elongation factor Tu (tufA) gene, partial cds; chloroplast. (1136 bp) |
| Sequence Accession: | EU221484 Cryptoglena skujai strain SAG10.88 16S small subunit ribosomal RNA gene, partial sequence; chloroplast. (1466 bp) |
| Sequence Accession: | EF525362 Cryptoglena skujai strain SAG10.88 large subunit ribosomal RNA gene, partial sequence; plastid. (1771 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | no |
