| SAG Strain Number: | 1032-1 |
| TAXONOMY |
| Genus: | Gomphonema |
| Species: | parvulum |
| Taxonomic position: | Heterokontophyta - Bacillariophyceae |
| Authority: | Kützing |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Heterokontophyta |
| Class: | Bacillariophyceae |
| Common name: | Diatoms |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | |
| Continent: | America |
| Country: | USA |
| Locality: | Connecticut |
| Lat. / Long. (Precision): | |
| Year: | 1950 |
| Isolated by: | J.C. Lewin |
| Strain number by isolator: | |
| Deposition by: | E.G. Pringsheim |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | Diat Ag |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Lamprecht O. et al. (2022) Synthetic periphyton as a model system to understand species dynamics in complex microbial freshwater communities. npj Biofilms Microbiomes 8:61 |
| Publication: | Sgier L. et al. (2018) Evaluation of Phototrophic Stream Biofilms Under Stress: Comparing Traditional and Novel Ecotoxicological Endpoints After Exposure to Diuron. Front. Microbiol. 9:2974 |
| Publication: | Sgier L. et al. (2016) Flow cytometry combined with viSNE for the analysis of microbial biofilms and detection of microplastics. Nat. Comm. 7:11587 |
| Publication: | Epp, L. S. et al. (2011) Molecular profiling of diatom assemblages in tropical lake sediments using taxon-specific PCR and Denaturing High-Performance Liquid Chromatography (PCR-DHPLC). Mol Ecol Resour 11 (5):842-53 |
| Publication: | Lang I. et al. (2011) Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection. BMC Plant Biol 11:124 |
| Publication: | Stadthagen T. (2007) Entwicklung eines online Gewässermonitoringsystems mittels Biosensorchips zum Nachweis ausgewählter Xenobiotika. |
| Publication: | Simon, D. et al. (2003) Phylogeny and self-splicing ability of the plastid tRNA-Leu group I Intron. J. Mol. Evol. 57 (6):710-720 |
| show more publications ... |
| SEQUENCE INFORMATION |
| Sequence Accession: | OK669058 UNVERIFIED: Gomphonema parvulum strain SAG 1032-1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit-like gene, partial sequence; chloroplast. (311 bp) |
| Sequence Accession: | OL304140 Gomphonema parvulum strain SAG 1032-1 small subunit ribosomal RNA gene, partial sequence. (571 bp) |
| Sequence Accession: | JQ003567 Gomphonema parvulum ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (1086 bp) |
| Sequence Accession: | KU948214 Gomphonema parvulum isolate EPSAG 1032-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence. (540 bp) |
| Sequence Accession: | GU053579 Gomphonema parvulum 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast. (379 bp) |
| CRYO |
| Cryopreservation: | low survival, standard 2-step protocol 5% DMSO regrowth on Agar |
| TEACHING |
| Recommended for teaching: | yes |
