| SAG Strain Number: | 1052-3a |
| TAXONOMY |
| Genus: | Nitzschia |
| Species: | palea |
| Taxonomic position: | Heterokontophyta - Bacillariophyceae |
| Authority: | (Kützing) W. Smith |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Heterokontophyta |
| Class: | Bacillariophyceae |
| Common name: | Diatoms |
| ORIGIN |
| General habitat: | soil |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Germany |
| Locality: | Göttingen, soil |
| Lat. / Long. (Precision): | 51.532268 / 9.94179 (5000m) View on Google Maps |
| Year: | 1942 |
| Isolated by: | H. v. Witsch |
| Strain number by isolator: | |
| Deposition by: | E.G. Pringsheim |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | Diat Ag |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | CCAP 1052/3 [dec.] |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; strain used for first mass culture of diatoms (Harder et al. 1943) |
| |
| PUBLICATIONS |
| Publication: | Lamprecht O. et al. (2022) Synthetic periphyton as a model system to understand species dynamics in complex microbial freshwater communities. npj Biofilms Microbiomes 8:61 |
| Publication: | Sgier L. et al. (2018) Evaluation of Phototrophic Stream Biofilms Under Stress: Comparing Traditional and Novel Ecotoxicological Endpoints After Exposure to Diuron. Front. Microbiol. 9:2974 |
| Publication: | Sgier L. et al. (2016) Flow cytometry combined with viSNE for the analysis of microbial biofilms and detection of microplastics. Nat. Comm. 7:11587 |
| Publication: | Stockenreiter, M. et al. (2013) Functional group richness: implications of biodiversity for light use and lipid yield in microalgae. J. Phycol. 49 (5):838-847 |
| Publication: | Epp, L. S. et al. (2011) Molecular profiling of diatom assemblages in tropical lake sediments using taxon-specific PCR and Denaturing High-Performance Liquid Chromatography (PCR-DHPLC). Mol Ecol Resour 11 (5):842-53 |
| Publication: | Lang I. et al. (2011) Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection. BMC Plant Biol 11:124 |
| Publication: | Stadthagen T. (2007) Entwicklung eines online Gewässermonitoringsystems mittels Biosensorchips zum Nachweis ausgewählter Xenobiotika. |
| Publication: | Harder, R. et al. (1943) Über Massenkultur von Diatomeen. Ber. Deutsch. Bot. Ges. 60:146-152 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | OK669059 UNVERIFIED: Nitzschia palea strain SAG 1052-3a ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit-like gene, partial sequence; chloroplast. (311 bp) |
| Sequence Accession: | OL304141 Nitzschia palea strain SAG 1052-3a small subunit ribosomal RNA gene, partial sequence. (568 bp) |
| Sequence Accession: | KU948217 Nitzschia palea isolate EPSAG 1052-3a 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence. (695 bp) |
| CRYO |
| Cryopreservation: | low survival, standard 2-step protocol 5% DMSO regrowth on Agar |
| TEACHING |
| Recommended for teaching: | yes |
