| SAG Strain Number: | 115.79 |
| TAXONOMY |
| Genus: | Rhodella |
| Species: | violacea |
| Taxonomic position: | Rhodophyta - Rhodophyceae |
| Authority: | (Kornmann) Wehrmeyer |
| Variety: | |
| Formerly called: | Porphyridium violaceum Kornmann |
| Authentic: | yes |
| Division: | Rhodophyta |
| Class: | Rhodophyceae |
| Common name: | Red Algae - Rhodophytes |
| ORIGIN |
| General habitat: | marine |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Germany |
| Locality: | List/Sylt, marine aquarium |
| Lat. / Long. (Precision): | 55.020907 / 8.438217 (400m) View on Google Maps |
| Year: | 1951 |
| Isolated by: | P. Kornmann |
| Strain number by isolator: | as Porphyridium violaceum spec. nov. |
| Deposition by: | P. Kornmann |
| Deposition date: | 08.1966 |
| CULTURE INFORMATION |
| Culture medium: | 1/2SWES |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | |
| Agitation resistance: | yes |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; OneKP Sample ID: RTLC |
| |
| PUBLICATIONS |
| Publication: | Kryvenda A. et al. (2023) Testing for terrestrial and freshwater microalgae productivity under elevated CO2 conditions and nutrient limitation. BMC Plant. Biol. 23:27 |
| Publication: | Wei G. et al. (2019) Terpene Biosynthesis in Red Algae Is Catalyzed by Microbial Type But Not Typical Plant Terpene Synthases. Plant Physiology 179 (2):382-390 |
| Publication: | Serive B. et al. (2017) Community analysis of pigment patterns from 37 microalgae strains reveals new carotenoids and porphyrins characteristic of distinct strains and taxonomic. PLOS One 12 (2):e0171872 |
| Publication: | Takaichi, Shinichi et al. (2016) Carotenogenesis diversification in phylogenetic lineages of Rhodophyta. Journal of Phycology 52 (3 ): 329-338 |
| Publication: | Yokoyama, A. et al. (2009) Corynoplastis japonica gen. et sp. nov. and Dixoniellales ord. nov. (Rhodellophyceae, Rhodophyta) based on morphological and molecular evidence. Phycol. Res. 57 (4):278-289 |
| Publication: | Yoon H.S. et al. (2006) Defining the major lineages of red algae (Rhodophyta). J. Phycol. 42 (2):482-492 |
| Publication: | Ciniglia, Claudia et al. (2004) Hidden biodiversity of the extremophilic Cyanidiales red algae. Molecular Ecology 13 (7):1827-1838 |
| Publication: | Yokoyama, A. et al. (2004) The generic delimitation of Rhodella (Porphyridiales, Rhodophyta) with emphasis on ultrastructure and molecular phylogeny. Hydrobiologia 512:177-183 |
| Publication: | Yoon, H. S. et al. (2004) A molecular timeline for the origin of photosynthetic eukaryotes. Mol Biol Evol 21 (5):809-18 |
| Publication: | Desquilbet, T.E. et al. (2003) In the Unicellular Red Alga Rhodella violacea Iron Deficiency Induces an Accumulation of Uncoupled LHC. Plant Cell Physiol 44 (11):1141-1151 |
| Publication: | Yoon, H. S. et al. (2002) A single origin of the peridinin- and fucoxanthin-containing plastids in dinoflagellates through tertiary endosymbiosis. Proc Natl Acad Sci U S A 99 (18):11724-9 |
| Publication: | Yoon, H. S. et al. (2002) The single, ancient origin of chromist plastids. Proc Natl Acad Sci U S A 99 (24):15507-12 |
| Publication: | Ritz, M. et al. (2000) Kinetics of Photoacclimation in Response to a Shift to High Light of the Red Alga Rhodella violacea Adapted to Low Irradiance. Plant Physiology 123 (4):1415-1426 |
| Publication: | RICHAUD, C. et al. (1997) The heme oxygenase gene (pbsA) in the red alga Rhodella violacea is discontinuous and transcriptionally activated during iron limitation. Proc. Natl. Acad. Sci. USA 94 (21):11736-11741 |
| Publication: | Pekárková B. (1989) Physiological properties of photosynthetic pigments in some Porphyridium and Rhodella species (Rhodophyceae). Arch. Hydrobiol. Suppl. (Algol. Stud. 55) 82 (2):197-206 |
| Publication: | Wehrmeyer W. (1971) Elektronenmikroskopische Untersuchung zur Feinstruktur von Porphyridium violaceum Kornmann mit Bemerkungen über seine taxonomische Stellung. Archiv. Mikrobiol. 75:121-139 |
| Publication: | Pringsheim E.G. (1968) Kleine Mitteilungen über Flagellaten und Algen. XV. Zur Kenntnis der Gattung Porphyridium (Rhodophyceae). Archiv für Mikrobiologie 61 (2):169-180 |
| Publication: | Kornmann, P. (1965) Porphyridium violaceum, eine marine neue Art. Helgoländer wiss. Meeresunters. 12:420-423 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | NC_062303 Rhodella violacea strain SAG 115.79 mitochondrion, complete genome. (45191 bp) |
| Sequence Accession: | NC_062301 Rhodella violacea strain SAG 115.79 chloroplast, complete genome. (903688 bp) |
| Sequence Accession: | MZ748321 Rhodella violacea strain SAG 115.79 mitochondrion, complete genome. (45191 bp) |
| Sequence Accession: | MZ853150 Rhodella violacea strain SAG 115.79 chloroplast, complete genome. (903688 bp) |
| Sequence Accession: | AY119742 Rhodella violacea strain SAG 115.79 photosystem II reaction center protein D1 (psbA) gene, partial cds; chloroplast. (957 bp) |
| Sequence Accession: | AY119776 Rhodella violacea strain SAG 115.79 ribulose-1,5-bisphosphate carboxylase/oxygenase (rbcL) gene, partial cds; chloroplast. (1215 bp) |
| Sequence Accession: | AY119706 Rhodella violacea strain SAG 115.79 photosystem I P700 chlorophyll A apoprotein A1 (psaA) gene, partial cds; chloroplast. (1377 bp) |
| Sequence Accession: | AF545622 Rhodella violacea strain SAG 115.79 voucher SAG:115.79 small subunit ribosomal RNA gene, partial sequence; chloroplast. (1360 bp) |
| Sequence Accession: | AF545598 Rhodella violacea strain SAG 115.79 voucher SAG:115.79 elongation factor Tu (tufA) gene, partial cds; chloroplast. (972 bp) |
| Sequence Accession: | AY391386 Rhodella violacea strain SAG 115.79 photosystem I P700 chlorophyll a apoprotein A2 (psaB) gene, partial cds; chloroplast. (1266 bp) |
| Sequence Accession: | DQ308461 Rhodella violacea strain SAG 115.79 photosystem II CP43 chlorophyll apoprotein (psbC) gene, partial cds; plastid. (933 bp) |
| Sequence Accession: | DQ308462 Rhodella violacea strain SAG 115.79 photosystem II protein D2 (psbD) gene, partial cds; plastid. (888 bp) |
| Sequence Accession: | AB045580 Rhodella violacea gene for 18S rRNA, partial sequence. (1731 bp) |
| Sequence Accession: | EU861396 Rhodella violacea strain SAG 115.79 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence. (847 bp) |
| Sequence Accession: | EU861395 Rhodella violacea strain SAG 115.79 18S ribosomal RNA gene, partial sequence. (1735 bp) |
| Sequence Accession: | ERS1830213 1000 Plants (1kP) RNA-Seq Transcriptome Sample ID: RTLC (0 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | no |
