| SAG Strain Number: | 1226-1c |
| TAXONOMY |
| Genus: | Eutreptia |
| Species: | viridis |
| Taxonomic position: | Euglenophyta - Euglenophyceae |
| Authority: | Perty |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Euglenophyta |
| Class: | Euglenophyceae |
| ORIGIN |
| General habitat: | brackish |
| Climatic zone: | |
| Continent: | Europe |
| Country: | United Kingdom |
| Locality: | Colchester, brackish |
| Lat. / Long. (Precision): | 51.894927 / 0.887833 (5000m) View on Google Maps |
| Year: | 1948 |
| Isolated by: | E. G. Pringsheim |
| Strain number by isolator: | |
| Deposition by: | E.G. Pringsheim (SAG) |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | 1/2SWES |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | CCAP 1226/1C |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Lakey, B. et al. (2017) The tetrapyrrole synthesis pathway as a model of horizontal gene transfer in euglenoids. J Phycol 53 (1):198–217 |
| Publication: | Kim,J.I. et al. (2015) Taxon-rich multigene phylogeny of photosynthetic euglenoids (Euglenophyceae). Frontiers in Ecology and Evolution 3 |
| Publication: | Kim J.I. et al. (2014) Molecular Phylogeny and Cryptic Diversity of the Genus Phacus (Phacaceae, Euglenophyceae) and the Descriptions of Seven New Species. J. Phycol. 50 (5):948-959 |
| Publication: | Milanowski R. et al. (2014) Distribution of Conventional and Nonconventional Introns in Tubulin (alpha and beta) Genes of Euglenids. Mol. Biol. Evol. 31 (3):584-593 |
| Publication: | Wiegert K.E. et al. (2012) Evolution of the Chloroplast Genome in Photosynthetic Euglenoids: A Comparison of Eutreptia viridis and Euglena gracilis (Euglenophyta). Protist 163:832-843 |
| Publication: | Kim J.I. et al. (2010) Multigene Analyses of Photosynthetic Euglenoids and New Family, Phacaceae (Euglenales). J. Phycol. 46 (6):1278–1287 |
| Publication: | Linton E.W. et al. (2010) Reconstructing Euglenoid Evolutionary Relationships using Three Genes: NuclearSSU and LSU, and Chloroplast SSUrDNA Sequences and the Description of Euglenaria gen. nov. (Euglenophyta). Protist 161:603-619 |
| Publication: | Milanowski, R. et al. (2006) Phylogeny of photosynthetic Euglenophytes based on combined chloroplast and cytoplasmic SSU rDNA sequence analysis. J. Phycol. 42 (3):721-730 |
| Publication: | Marin, B. et al. (2003) Phylogeny and taxonomic revision of plastid-containing Euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure. Protist 154 (1):99-145 |
| Publication: | Milanowski, R. et al. (2001) Phylogenetic analysis of chloroplast small-subunit rRNA genes of the genus Euglena Ehrenberg. Int J Syst Evol Microbiol 51 (Pt 3):773-81 |
| show more publications ... |
| SEQUENCE INFORMATION |
| Sequence Accession: | AF289247 Eutreptia viridis strain SAG 1226-1c culture-collection SAG:1226-1c 16S ribosomal RNA gene, partial sequence; chloroplast. (1423 bp) |
| Sequence Accession: | AY035985 Eutreptia viridis strain SAG 1226-1c ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) mRNA, partial cds; chloroplast. (1033 bp) |
| Sequence Accession: | AY221731 Eutreptia viridis strain SAG 1226-1c elongation factor TU (tufA) gene, partial cds; chloroplast. (1136 bp) |
| Sequence Accession: | DQ140108 Eutreptia viridis strain SAG1226-1c large subunit ribosomal RNA gene, partial sequence. (3576 bp) |
| Sequence Accession: | KU500780 Eutreptia viridis plastid uroporphyrinogen decarboxylase isoform 2 mRNA, partial cds; nuclear gene for plastid product. (1341 bp) |
| Sequence Accession: | KU500765 Eutreptia viridis plastid uroporphyrinogen decarboxylase isoform 1 mRNA, partial cds; nuclear gene for plastid product. (447 bp) |
| Sequence Accession: | KU500745 Eutreptia viridis plastid coproporphyrinogen oxidase isoform 1 mRNA, partial cds; nuclear gene for plastid product. (1212 bp) |
| Sequence Accession: | KU500672 Eutreptia viridis plastid protoporphyrinogen oxidase mRNA, partial cds; nuclear gene for plastid product. (1329 bp) |
| Sequence Accession: | KU375881 Eutreptia viridis plastid uroporphyrinogen synthase mRNA, partial cds; nuclear gene for plastid product. (351 bp) |
| Sequence Accession: | KU375864 Eutreptia viridis plastid porphobilinogen synthase mRNA, partial cds; nuclear gene for plastid product. (1662 bp) |
| Sequence Accession: | KU375835 Eutreptia viridis plastid porphobilinogen deaminase mRNA, partial cds; nuclear gene for plastid product. (1446 bp) |
| Sequence Accession: | KU375787 Eutreptia viridis plastid glutamate 1-semialdehyde 2,1-aminotransferase mRNA, partial cds; nuclear gene for plastid product. (1767 bp) |
| Sequence Accession: | KU355535 Eutreptia viridis cytosolic glutamyl tRNA synthetase mRNA, partial cds. (1572 bp) |
| Sequence Accession: | KU355508 Eutreptia viridis plastid glutamyl tRNA synthetase mRNA, partial cds; nuclear gene for plastid product. (1680 bp) |
| Sequence Accession: | KT714082 Eutreptia viridis culture-collection SAG:12261c plastid sedoheptulose-1,7-bisphosphatase mRNA, partial cds; nuclear gene for plastid product. (1014 bp) |
| Sequence Accession: | KT731180 Eutreptia viridis culture-collection SAG:12261c ribulose-1,5-bisphosphate carboxylase/oxygenase subunit isoform 5 mRNA, partial cds. (582 bp) |
| Sequence Accession: | KT731179 Eutreptia viridis culture-collection SAG:12261c ribulose-1,5-bisphosphate carboxylase/oxygenase subunit isoform 4 mRNA, partial cds. (672 bp) |
| Sequence Accession: | KT731178 Eutreptia viridis culture-collection SAG:12261c ribulose-1,5-bisphosphate carboxylase/oxygenase subunit isoform 3 mRNA, partial cds. (798 bp) |
| Sequence Accession: | KT731177 Eutreptia viridis culture-collection SAG:12261c ribulose-1,5-bisphosphate carboxylase/oxygenase subunit isoform 2 mRNA, partial cds. (483 bp) |
| Sequence Accession: | KT731176 Eutreptia viridis culture-collection SAG:12261c ribulose-1,5-bisphosphate carboxylase/oxygenase subunit isoform 1 mRNA, partial cds. (810 bp) |
| Sequence Accession: | KT718655 Eutreptia viridis culture-collection SAG:12261c plastid triosephosphate isomerase mRNA, partial cds; nuclear gene for plastid product. (1116 bp) |
| Sequence Accession: | KT718634 Eutreptia viridis culture-collection SAG:12261c triosephosphate isomerase mRNA, partial cds. (762 bp) |
| Sequence Accession: | KT633545 Eutreptia viridis culture-collection SAG:12261c plastid ribose-5-phosphate isomerase mRNA, partial cds; nuclear gene for plastid product. (747 bp) |
| Sequence Accession: | KT591624 Eutreptia viridis culture-collection SAG:12261c plastid phosphoribulokinase mRNA, partial cds; nuclear gene for plastid product. (1383 bp) |
| Sequence Accession: | KT588879 Eutreptia viridis culture-collection SAG:12261c plastid glyceraldehyde 3-phosphate dehydrogenase mRNA, partial cds; nuclear gene for plastid product. (1413 bp) |
| Sequence Accession: | KT588853 Eutreptia viridis culture-collection SAG:12261c glyceraldehyde 3-phosphate dehydrogenase isoform 2 mRNA, partial cds. (1089 bp) |
| Sequence Accession: | KT588852 Eutreptia viridis culture-collection SAG:12261c glyceraldehyde 3-phosphate dehydrogenase isoform 1 mRNA, partial cds. (1056 bp) |
| Sequence Accession: | KT350569 Eutreptia viridis culture-collection SAG:1226-1c fructose 1,6-bisphosphatase mRNA, partial cds. (951 bp) |
| Sequence Accession: | KT350570 Eutreptia viridis plastid fructose 1,6-bisphosphatase mRNA, partial cds; nuclear gene for plastid product. (1638 bp) |
| Sequence Accession: | KJ158188 Eutreptia viridis strain SAG1226-1c large subunit ribosomal RNA gene, partial sequence. (912 bp) |
| Sequence Accession: | AJ532395 Eutreptia viridis partial 18S rRNA gene, strain SAG 1226-1c. (2227 bp) |
| Sequence Accession: | KC907651 Eutreptia viridis strain SAG 1226-1c alpha-tubulin (tubA) gene, partial cds. (1060 bp) |
| Sequence Accession: | KC907693 Eutreptia viridis strain SAG 1226-1c beta-tubulin (tubB) gene, partial cds. (1144 bp) |
| Sequence Accession: | JQ478729 UNVERIFIED: Eutreptia viridis strain SAG 1226-1c HSP90 (Hsp90) gene, partial sequence. (1901 bp) |
| Sequence Accession: | JQ478679 UNVERIFIED: Eutreptia viridis strain SAG 1226-1c psbO gene, complete sequence. (460 bp) |
| Sequence Accession: | FJ719670 Eutreptia viridis strain SAG1226-1c 16S ribosomal RNA gene, partial sequence; chloroplast. (1445 bp) |
| Sequence Accession: | EF525294 Eutreptia viridis strain SAG 1226-1c large subunit ribosomal RNA gene, partial sequence; plastid. (1738 bp) |
| show more sequences ... |
| CRYO |
| Cryopreservation: | 2-step: no survival 5% DMSO |
| TEACHING |
| Recommended for teaching: | no |
