| SAG Strain Number: | 1261-3b |
| TAXONOMY |
| Genus: | Phacus |
| Species: | pleuronectes |
| Taxonomic position: | Euglenophyta - Euglenophyceae |
| Authority: | (O.F. Müller) Dujardin |
| Variety: | |
| Formerly called: | |
| Authentic: | yes |
| Division: | Euglenophyta |
| Class: | Euglenophyceae |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | United Kingdom |
| Locality: | |
| Lat. / Long. (Precision): | |
| Year: | 1941 |
| Isolated by: | E. G. Pringsheim |
| Strain number by isolator: | |
| Deposition by: | E.G. Pringsheim (SAG) |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | ErbsS |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Karnkowska, A. et al. (2018) Dynamic evolution of inverted repeats in Euglenophyta plastid genomes. Sci. Rep. 8:16071 |
| Publication: | Łukomska-Kowalczyk, Maja et al. (2016) DNA barcoding in autotrophic euglenids: evaluation of COI and 18s rDNA. Journal of Phycology 52:951-960 |
| Publication: | Bennett M.S. et al. (2015) Chloroplast Genome Evolution in the Euglenaceae. J. Eukaryot. Microbiol. 62 (6):773-785 |
| Publication: | Kim,J.I. et al. (2015) Taxon-rich multigene phylogeny of photosynthetic euglenoids (Euglenophyceae). Frontiers in Ecology and Evolution 3 |
| Publication: | Linton E.W. et al. (2010) Reconstructing Euglenoid Evolutionary Relationships using Three Genes: NuclearSSU and LSU, and Chloroplast SSUrDNA Sequences and the Description of Euglenaria gen. nov. (Euglenophyta). Protist 161:603-619 |
| Publication: | Kosmala S. et al. (2007) Morphological and molecular examination of relationships and epitype establishment of Phacus pleuronectes, Phacus orbicularis, and Phacus hamelii. J. Phycol. 43 (5):1071-1082 |
| Publication: | Milanowski, R. et al. (2006) Phylogeny of photosynthetic Euglenophytes based on combined chloroplast and cytoplasmic SSU rDNA sequence analysis. J. Phycol. 42 (3):721-730 |
| Publication: | Kosmala, S. et al. (2005) PHYLOGENETIC AND TAXONOMIC POSITION OF LEPOCINCLIS FUSCA COMB. NOV. (=EUGLENA FUSCA) (EUGLENACEAE): MORPHOLOGICAL AND MOLECULAR JUSTIFICATION. J. Phycol. 41:1258-1267 |
| Publication: | Brosnan, S. et al. (2003) Phylogeny of the photosynthetic euglenophytes inferred from the nuclear SSU and partial LSU rDNA. Int. J. Syst. Evol. Microbiol. 53 (4):1175-1186 |
| Publication: | Marin, B. et al. (2003) Phylogeny and taxonomic revision of plastid-containing Euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure. Protist 154 (1):99-145 |
| Publication: | Milanowski, R. et al. (2001) Phylogenetic analysis of chloroplast small-subunit rRNA genes of the genus Euglena Ehrenberg. Int J Syst Evol Microbiol 51 (Pt 3):773-81 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | NC_039927 Phacus pleuronectes voucher SAG 1261-3b chloroplast, complete genome. (90869 bp) |
| Sequence Accession: | MH898673 Phacus pleuronectes voucher SAG 1261-3b chloroplast, complete genome. (90869 bp) |
| Sequence Accession: | AF289251 Phacus pleuronectes strain SAG 1261-3b culture-collection SAG:1261-3b 16S ribosomal RNA gene, partial sequence; chloroplast. (1392 bp) |
| Sequence Accession: | AY130824 Phacus pleuronectes strain SAG 1261-3b voucher Samml. Algenkultur. Gottingen (SAG) 1261-3b large subunit ribosomal RNA gene, partial sequence. (3790 bp) |
| Sequence Accession: | JQ398643 UNVERIFIED: Phacus pleuronectes strain SAG 1261-3b chloroplast oxygen-evolving enhancer protein 1 precursor-like (psbO) mRNA, partial sequence. (701 bp) |
| Sequence Accession: | KU609255 Phacus pleuronectes strain SAG 1224-3b cytochrome oxidase subunit I (cox1) gene, partial cds; mitochondrial. (820 bp) |
| Sequence Accession: | KF744140 Phacus pleuronectes strain SAG1261-13b 26S large subunit ribosomal RNA gene, partial sequence. (989 bp) |
| Sequence Accession: | AJ532475 partial 18S rRNA gene (2152 bp) |
| Sequence Accession: | JQ478746 UNVERIFIED: Phacus pleuronectes strain SAG 1261-3b HSP90 (Hsp90) gene, partial sequence. (1901 bp) |
| Sequence Accession: | JQ478698 UNVERIFIED: Phacus pleuronectes strain SAG 1261-3b psbO gene, complete sequence. (455 bp) |
| Sequence Accession: | JN984856 Phacus pleuronectes elongation factor Tu (tufA) gene, partial cds; chloroplast. (1136 bp) |
| Sequence Accession: | EF525341 Phacus pleuronectes strain SAG1261-3b large subunit ribosomal RNA gene, partial sequence; plastid. (1759 bp) |
| Sequence Accession: | DQ397669 Phacus pleuronectes strain SAG 1261-3B 18S small subunit ribosomal RNA gene, partial sequence. (1980 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | yes |
