| SAG Strain Number: | 1283-14 |
| TAXONOMY |
| Genus: | Trachelomonas |
| Species: | similis |
| Taxonomic position: | Euglenophyta - Euglenophyceae |
| Authority: | Stokes |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Euglenophyta |
| Class: | Euglenophyceae |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | |
| Continent: | Europe |
| Country: | United Kingdom |
| Locality: | East Anglia, pond near Debden |
| Lat. / Long. (Precision): | 51.658155 / 0.058236 (3000m) View on Google Maps |
| Year: | 1945 |
| Isolated by: | E.G. Pringsheim |
| Strain number by isolator: | |
| Deposition by: | E.G. Pringsheim (SAG) |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | ErbsMS |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | UTEX 1323 |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Shumilovskikh L.S. et al. (2019) Non-pollen palynomorphs notes: 3. Phototrophic loricate euglenoids in paleoecology and the effect of acetolysis on Trachelomonas loricae. Rev. Palaeobot. Palynol. 270:1-7 |
| Publication: | Łukomska-Kowalczyk, Maja et al. (2016) DNA barcoding in autotrophic euglenids: evaluation of COI and 18s rDNA. Journal of Phycology 52:951-960 |
| Publication: | Kim,J.I. et al. (2015) Taxon-rich multigene phylogeny of photosynthetic euglenoids (Euglenophyceae). Frontiers in Ecology and Evolution 3 |
| Publication: | Milanowski R. et al. (2014) Distribution of Conventional and Nonconventional Introns in Tubulin (alpha and beta) Genes of Euglenids. Mol. Biol. Evol. 31 (3):584-593 |
| Publication: | Kim J.I. et al. (2010) Multigene Analyses of Photosynthetic Euglenoids and New Family, Phacaceae (Euglenales). J. Phycol. 46 (6):1278–1287 |
| Publication: | Linton E.W. et al. (2010) Reconstructing Euglenoid Evolutionary Relationships using Three Genes: NuclearSSU and LSU, and Chloroplast SSUrDNA Sequences and the Description of Euglenaria gen. nov. (Euglenophyta). Protist 161:603-619 |
| Publication: | Milanowski, R. et al. (2006) Phylogeny of photosynthetic Euglenophytes based on combined chloroplast and cytoplasmic SSU rDNA sequence analysis. J. Phycol. 42 (3):721-730 |
| Publication: | Triemer, R.E. et al. (2006) Phylogeny of the Euglenales based upon combined SSU and LSU rDNA sequence comparisons and description of Discoplastis gen. nov. (Euglenophyta). J. Phycol. 42 (3):731-740 |
| Publication: | Pringsheim, E.G. (1953) Observations on some species of Trachelomonas grown in culture. New Phytol. 52 (3):238-266 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | AY359948 Trachelomonas similis strain SAG 1283-14 large subunit ribosomal RNA gene, partial sequence. (3146 bp) |
| Sequence Accession: | DQ249885 Trachelomonas similis strain SAG 1283-14 18S small subunit ribosomal RNA gene, partial sequence. (1921 bp) |
| Sequence Accession: | DQ140142 Trachelomonas similis small subunit ribosomal RNA gene, complete sequence. (2177 bp) |
| Sequence Accession: | AY626055 Trachelomonas similis strain SAG 1283-14 16S small subunit ribosomal RNA gene, partial sequence; chloroplast. (1405 bp) |
| Sequence Accession: | JQ398648 UNVERIFIED: Trachelomonas similis strain SAG 1283-14 chloroplast oxygen-evolving enhancer protein 1 precursor-like (psbO) mRNA, partial sequence. (698 bp) |
| Sequence Accession: | JQ398668 UNVERIFIED: Trachelomonas similis strain SAG 1283-14 heat shock protein 90-like (hsp90) mRNA, partial sequence. (744 bp) |
| Sequence Accession: | KU609257 Trachelomonas similis strain SAG1283-14 cytochrome oxidase subunit I (cox1) gene, partial cds; mitochondrial. (820 bp) |
| Sequence Accession: | KT304999 Trachelomonas similis strain SAG1283-14 large subunit ribosomal RNA gene, partial sequence. (998 bp) |
| Sequence Accession: | KC907642 Trachelomonas similis strain SAG 1283-14 alpha-tubulin (tubA) gene, partial cds. (1379 bp) |
| Sequence Accession: | KC907671 Trachelomonas similis strain SAG 1283-14 beta-tubulin (tubB) gene, partial cds. (3176 bp) |
| Sequence Accession: | FJ719708 Trachelomonas similis strain SAG1283-14 16S ribosomal RNA gene, partial sequence; chloroplast. (1432 bp) |
| Sequence Accession: | EF525381 large subunit ribosomal RNA gene, partial sequence; plastid. (1776 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | no |
