SAG Strain Number: | 168.80 |
TAXONOMY |
Genus: | Roya |
Species: | obtusa |
Taxonomic position: | Streptophyta - Zygnematophyceae |
Authority: | (de Brébisson) W. et G.S. West |
Variety: | |
Formerly called: | |
Authentic: | no |
Division: | Streptophyta |
Class: | Zygnematophyceae |
ORIGIN |
General habitat: | freshwater |
Climatic zone: | temperate |
Continent: | Europe |
Country: | Germany |
Locality: | Marburg, Lahnberge |
Lat. / Long. (Precision): | 50.833806 / 8.799949 (3000m) View on Google Maps |
Year: | 1963 |
Isolated by: | M. Mix |
Strain number by isolator: | 268 |
Deposition by: | M. Mix (SVCK) |
Deposition date: | before 1980 |
CULTURE INFORMATION |
Culture medium: | ESP Ag |
Axenic: | axenic |
Strain relatives: | SVCK 268 |
Agitation resistance: | yes |
Special properties: | NO known Nagoya Protocol restrictions for this strain |
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PUBLICATIONS |
Publication: | Lemieux C. et al. (2016) Comparative Chloroplast Genome Analyses of Streptophyte Green Algae Uncover Major Structural Alterations in the Klebsormidiophyceae, Coleochaetophyceae and Zygnematophyceae. Front Plant Sci 7:697 |
Publication: | Turmel, M. et al. (2013) Tracing the evolution of streptophyte algae and their mitochondrial genome. Genome Biol Evol 5 (10):1817-35 |
Publication: | Hall J.D. et al. (2008) PHYLOGENY OF THE CONJUGATING GREEN ALGAE BASED ON CHLOROPLAST AND MITOCHONDRIAL NUCLEOTIDE SEQUENCE DATA. J. Phycol. 44 (2):467-477 |
Publication: | Besendahl, A. et al. (2000) The cyanobacterial origin and vertical transmission of the plastid tRNA(Leu) group-I intron. Curr. Genet. 37 (1):12-23 |
SEQUENCE INFORMATION |
Sequencing Project: | PRJNA229047 Roya obtusa culture-collection SAG:168.80 mitochondrion, complete genome |
Sequence Accession: | KM020153 Roya obtusa strain SAG 168.80 18S ribosomal RNA gene, partial sequence. (2286 bp) |
Sequence Accession: | AF182361 Roya obtusa culture-collection SAG:B 168.80 tRNA-Leu gene, intron; chloroplast. (285 bp) |
Sequence Accession: | KU646496 Roya obtusa culture-collection SAG:168.80 chloroplast, complete genome. (138272 bp) |
Sequence Accession: | NC_022863 Roya obtusa culture-collection SAG:168.80 mitochondrion, complete genome. (69465 bp) |
Sequence Accession: | KF060943 Roya obtusa culture-collection SAG:168.80 mitochondrion, complete genome. (69465 bp) |
Sequence Accession: | EF371331 Roya obtusa strain SAG 168.80 ribulose-1,5-bisphophate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (1353 bp) |
Sequence Accession: | EF371232 Roya obtusa strain SAG 168.80 photosystem I P700 chlorophyll A apoprotein A1 (psaA) gene, partial cds; chloroplast. (2084 bp) |
Sequence Accession: | EF371125 Roya obtusa strain SAG 168.80 cytochrome oxidase subunit III (cox III) gene, partial cds; mitochondrial. (609 bp) |
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CRYO |
Cryopreservation: | good survival, standard 2-step protocol 5% DMSO |
TEACHING |
Recommended for teaching: | no |