| SAG Strain Number: | 17.84 |
| TAXONOMY |
| Genus: | Ankyra |
| Species: | judayi |
| Taxonomic position: | Chlorophyta - Chlorophyceae |
| Authority: | (G.M. Smith) Fott |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Chlorophyta |
| Class: | Chlorophyceae |
| Common name: | Green Algae - Chlorophytes |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | |
| Continent: | Europe |
| Country: | United Kingdom |
| Locality: | Malham Tarn, plankton |
| Lat. / Long. (Precision): | 54.099595 / -2.158949 (1000m) View on Google Maps |
| Year: | 1960 |
| Isolated by: | H. Belcher |
| Strain number by isolator: | 1960/1 |
| Deposition by: | CAUP (M. Puncocharova) |
| Deposition date: | 10.1982 |
| CULTURE INFORMATION |
| Culture medium: | ES |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | CAUP H 2201 |
| Agitation resistance: | yes |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; |
| |
| PUBLICATIONS |
| Publication: | Fucikova K. et al. (2016) Comparative analyses of chloroplast genome data representing nine green algae in Sphaeropleales (Chlorophyceae, Chlorophyta). Data Brief 7:558-70 |
| Publication: | Fucikova K. et al. (2016) Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns of sequence evolution. Mol Phylogenet Evol 98:176-83 |
| Publication: | Fučíková K. et al. (2014) Putting incertae sedis taxa in their place: a proposal for ten new families and three new genera in Sphaeropleales (Chlorophyceae, Chlorophyta). Journal of Phycology 50 (1):14-25 |
| Publication: | Caisová L. et al. (2013) A Consensus Secondary Structure of ITS2 in the Chlorophyta Identified by Phylogenetic Reconstruction. Protist 164 (4):482-496 |
| Publication: | Keller A. et al. (2008) ITS2 data corroborate a monophyletic chlorophycean DO-group (Sphaeropleales). BMC Evolutionary Biology 8:218 |
| Publication: | Wolf, M. et al. (2002) Phylogenetic position of the Sphaeropleaceae (Chlorophyta). Plant Syst. Evol. 230 (3/4):161-171 |
| Publication: | Fott, B. (1974) Taxonomische Übersicht der Gattung Ankyra Fott 1957 (Characiaceae, Chlorococcales). Preslia (Praha) 46 (4):289-299 |
| show more publications ... |
| SEQUENCE INFORMATION |
| Sequencing Project: | PRJNA316226 Ankyra judayi genome reference project |
| Sequence Accession: | U73469 Ankyra judayi strain SAG B 17.84 18S ribosomal RNA gene, partial sequence. (1701 bp) |
| Sequence Accession: | AF183448 Ankyra judayi strain SAG B 17.84 culture-collection SAG:17.84 28S ribosomal RNA gene, partial sequence. (2121 bp) |
| Sequence Accession: | NC_029735 Ankyra judayi strain SAG 17.84 chloroplast, complete genome. (157224 bp) |
| Sequence Accession: | KT199255 Ankyra judayi strain SAG 17.84 chloroplast, complete genome. (157224 bp) |
| Sequence Accession: | KC145526 Ankyra judayi strain SAG 17.84 elongation factor tu (tufA) gene, partial cds. (883 bp) |
| Sequence Accession: | KC145506 Ankyra judayi strain SAG 17.84 photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast. (1090 bp) |
| Sequence Accession: | KC145484 Ankyra judayi strain SAG 17.84 P700 chlorophyll a apoprotein A2 (psaB) gene, partial cds. (1755 bp) |
| Sequence Accession: | KC145467 Ankyra judayi strain SAG 17.84 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence. (652 bp) |
| Sequence Accession: | EU352800 Ankyra judayi strain SAG 17.84 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence. (328 bp) |
| Sequence Accession: | EF113484 Ankyra judayi strain SAG 17.84 AtpB (atpB) gene, partial cds; chloroplast. (1178 bp) |
| Sequence Accession: | EF113408 Ankyra judayi strain SAG 17.84 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (998 bp) |
| show more sequences ... |
| CRYO |
| Cryopreservation: | low survival |
| TEACHING |
| Recommended for teaching: | no |
