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SAG 17.86 Scherffelia dubia

SAG Strain Number:17.86
TAXONOMY
Genus:Scherffelia
Species:dubia
Taxonomic position:Chlorophyta - Chlorodendrophyceae
Authority:Pascher
Variety:
Formerly called:
Authentic:no
Division:Chlorophyta
Class:Chlorodendrophyceae
ORIGIN
General habitat:freshwater
Climatic zone:
Continent:Europe
Country:United Kingdom
Locality:Essex, pond in Epping Forest
Lat. / Long.  (Precision):51.692591 / 0.153133  (50m)   View on Google Maps
Year:1983
Isolated by:H.R. Preisig
Strain number by isolator:
Deposition by:M. Melkonian
Deposition date:03.1986
CULTURE INFORMATION
Culture medium:MiEB12
Axenic:bacterial or other types of contamination
Strain relatives:CCAC 0019
Agitation resistance:not detected
Special properties:NO known Nagoya Protocol restrictions for this strain;
 
PUBLICATIONS
Publication:Turmel, Monique et al. (2016) Distinctive Architecture of the Chloroplast Genome in the Chlorodendrophycean Green Algae Scherffelia dubia and Tetraselmis sp. CCMP 881. PLOS One 11 (2):e0148934
Publication:Marin, B. (2012) Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae (Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded rRNA operons. Protist 163 (5):778-805
Publication:Marin B. et al. (2010) Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastidencoded rRNA operons. 161 (2):304-336
Publication:Simon, D. et al. (2003) Phylogeny and self-splicing ability of the plastid tRNA-Leu group I Intron. J. Mol. Evol. 57 (6):710-720
Publication:Grunow A. et al. (1999) V-ATPase is a Major Component of the Golgi Complex in the Scaly Green Flagellate Scherffelia dubia. Protist 150 (3):265-281
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SEQUENCE INFORMATION
Sequencing Project:PRJNA317903  Scherffelia dubia genome reference project
Sequence Accession:AF393609  Scherffelia dubia strain SAG 17.86 voucher SAG:17.86 small subunit ribosomal RNA (rrs), tRNA-Ile (trnI(gau)), tRNA-Ala (trnA(ugc)), and large subunit ribosomal RNA (rrl) genes, complete sequence; and putative site-specific DNA endonuclease (orf167) g (5476 bp)
Sequence Accession:L44126  Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene.  (3334 bp)
Sequence Accession:KU167098  Scherffelia dubia culture-collection SAG:17.86 plastid, complete genome.  (137161 bp)
Sequence Accession:AJ312020  Scherffelia dubia partial mRNA for luminal binding protein (bip gene), strain SAG 17.86 (2040 bp)
Sequence Accession:AJ312021  Scherffelia dubia mRNA for coatomer delta subunit (copd gene), strain SAG 17.86. (1565 bp)
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CRYO
Cryopreservation:not detected
TEACHING
Recommended for teaching:no