| SAG Strain Number: | 198.80 |
| TAXONOMY |
| Genus: | Polytomella |
| Species: | spec. |
| Taxonomic position: | Chlorophyta - Chlorophyceae |
| Authority: | |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Chlorophyta |
| Class: | Chlorophyceae |
| Common name: | Green Algae - Chlorophytes |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | |
| Continent: | |
| Country: | |
| Locality: | |
| Lat. / Long. (Precision): | |
| Year: | before 1970 |
| Isolated by: | E. G. Pringsheim |
| Strain number by isolator: | formerly held as SAG 63-12 |
| Deposition by: | E.G. Pringsheim (SAG) |
| Deposition date: | before 1970 |
| CULTURE INFORMATION |
| Culture medium: | ErbsMS |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Fuentes-Ramírez E.O. et al. (2021) The plastid proteome of the nonphotosynthetic chlorophycean alga Polytomella parva. Microbiol. Res. 243:126649 |
| Publication: | Sánchez-Vásquez L. et al. (2017) Near-neighbor interactions of the membrane-embedded subunits of the mitochondrial ATP synthase of a chlorophycean alga. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1858 (7):497-509 |
| Publication: | Colina-Tenorio L. et al. (2016) Subunit Asa1 spans all the peripheral stalk of the mitochondrial ATP synthase of the chlorophycean alga Polytomella sp. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1857 (4):359-360 |
| Publication: | MacDonald, S. M. et al. (2016) A survey of Polytomella (Chlorophyceae, Chlorophyta) strains in public culture collections. J Phycol 52 (4):656-663 |
| Publication: | Figueroa-Martinez F. et al. (2015) When the lights go out: the evolutionary fate of free-living colorless green algae. New Phytologist 206 (3):972-982 |
| Publication: | Miranda-Astudillo H. et al. (2014) Interactions of subunits Asa2, Asa4 and Asa7 in the peripheral stalk of the mitochondrial ATP synthase of the chlorophycean alga Polytomella sp. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1837 (1):1-13 |
| Publication: | Smith D.R. et al. (2013) Palindromic Genes in the Linear Mitochondrial Genome of the Nonphotosynthetic Green Alga Polytomella magna. Genome Biol. Evol. 5 (9):1661-1667 |
| Publication: | Smith D.R. et al. (2011) Nucleotide diversity of the colorless green alga Polytomella parva (Chlorophyceae, Chlorophyta): high for the mitochondrial telomeres, surprisingly low everywhere else. J. Eukaryot. Microbiol. 58 (5):471-473 |
| Publication: | Cano-Estrada A. et al. (2010) Subunit–subunit interactions and overall topology of the dimeric mitochondrial ATP synthase of Polytomella sp. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1797 (8):1439–1448 |
| Publication: | Villavicencio-Queijeiro A. et al. (2009) The fully-active and structurally-stable form of the mitochondrial ATP synthase of Polytomella sp. is dimeric. J. Bioenerg. Biomembr. 41:1-13 |
| Publication: | van Lis, R. et al. (2007) New insights into the unique structure of the F0F1-ATP synthase from the chlamydomonad algae Polytomella sp. and Chlamydomonas reinhardtii. Plant Physiol 144 (2):1190-9 |
| Publication: | Mallet, M.A. et al. (2006) Identification of three distinct Polytomella lineages based on mitochondrial DNA features. J. Eukaryot. Microbiol. 53 (2):79-84 |
| Publication: | Vázquez-Acevedo, M. et al. (2006) The mitochondrial ATP synthase of chlorophycean algae contains eight subunits of unknown origin involved in the formation of an atypical stator-stalk and in the dimerization of the complex. J. Bioenerg. Biomembr. 38:271–282 |
| Publication: | Pérez-Martı́nez, X. et al. (2001) Subunit II of Cytochrome c Oxidase in Chlamydomonad Algae Is a Heterodimer Encoded by Two Independent Nuclear Genes. J. Biol. Chem. 276 (14):11302-11309 |
| Publication: | Gutiérrez-Cirlos E.B. et al. (1994) A highly active ubiquinol-cytochrome c reductase (bc1 complex) from the colorless alga Polytomella spp., a close relative of Chlamydomonas. Characterization of the heme binding site of cytochrome c1. J. Biol. Chem. 269 (12):9147-9154 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | LR634018 Polytomella sp. Pringsheim 198.80 mRNA for aldehyde/alcohol dehydrogenase 1 (ADHE1 gene), strain Polytomella SAG 198.90. (2973 bp) |
| Sequence Accession: | HQ585014 Polytomella sp. SAG 198.80 NADH dehydrogenase subunit 2 (nad2) gene, partial cds; large subunit ribosomal RNA (rrnL8), large subunit ribosomal RNA (rrnL2), and small subunit ribosomal RNA (rrnS3) genes, complete sequence; and NADH dehydrogenase subun (1303 bp) |
| Sequence Accession: | HQ585009 Polytomella sp. SAG 198.80 NADH dehydrogenase subunit 5 (nad5) gene, partial cds; large subunit ribosomal RNA (rrnL1), small subunit ribosomal RNA (rrnS4), large subunit ribosomal RNA (rrnL5), large subunit ribosomal RNA (rrnL4), small subunit riboso (3827 bp) |
| Sequence Accession: | HQ585004 Polytomella sp. SAG 198.80 cytochrome b (cob) gene, partial cds; small subunit ribosomal RNA (rrnS1) and large subunit ribosomal RNA (rrnL7) genes, complete sequence; cytochrome oxidase subunit 1 (cox1) gene, complete cds; and NADH dehydrogenase subu (3246 bp) |
| Sequence Accession: | HQ584998 Polytomella sp. SAG 198.80 mitochondrial cytochrome c oxidase subunit III (cox3) gene, partial cds; nuclear gene for mitochondrial product. (1775 bp) |
| Sequence Accession: | HQ584993 Polytomella sp. SAG 198.80 18S ribosomal RNA gene, partial sequence. (1032 bp) |
| Sequence Accession: | JN652595 Polytomella sp. Pringsheim 198.80 mitochondrial cytochrome c oxidase subunit II (cox2a) mRNA, complete cds; nuclear gene for mitochondrial product. (816 bp) |
| Sequence Accession: | DQ223139 Polytomella sp. Pringsheim 198.80 cytochrome c oxidase subunit I (cox1) gene, partial cds; mitochondrial. (546 bp) |
| Sequence Accession: | KT591092 Polytomella sp. SAG 198.80 chromosome 1 telomere; mitochondrial. (1093 bp) |
| Sequence Accession: | AF332964 protoporphyrinogen oxidase mRNA, complete cds. (2060 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | no |
