| SAG Strain Number: | 2004 |
| TAXONOMY |
| Genus: | Kirchneriella |
| Species: | aperta |
| Taxonomic position: | Chlorophyta - Chlorophyceae |
| Authority: | Teiling 1912 |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Chlorophyta |
| Class: | Chlorophyceae |
| Common name: | Green Algae - Chlorophytes |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Germany |
| Locality: | Lake Stechlin near Rheinsberg |
| Lat. / Long. (Precision): | 53.149962 / 13.019457 (3000m) View on Google Maps |
| Year: | 1988 |
| Isolated by: | L. Krienitz |
| Strain number by isolator: | KR 1988/2 |
| Deposition by: | L. Krienitz |
| Deposition date: | 23.02.2000 |
| CULTURE INFORMATION |
| Culture medium: | MBB+V Ag |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Fucikova K. et al. (2016) Comparative analyses of chloroplast genome data representing nine green algae in Sphaeropleales (Chlorophyceae, Chlorophyta). Data Brief 7:558-70 |
| Publication: | Fucikova K. et al. (2016) Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns of sequence evolution. Mol Phylogenet Evol 98:176-83 |
| Publication: | Garcia da T.S. et al. (2016) Selenastraceae (Sphaeropleales, Chlorophyceae): rbcL, 18S rDNA and ITS-2 secondary structure enlightens traditional taxonomy, with description of two new genera, Messastrum gen. nov. and Curvastrum gen. nov. Fottea 17 (1):1-19 |
| Publication: | Fučíková K. et al. (2014) Putting incertae sedis taxa in their place: a proposal for ten new families and three new genera in Sphaeropleales (Chlorophyceae, Chlorophyta). Journal of Phycology 50 (1):14-25 |
| Publication: | Fučíková K. et al. (2014) Gene arrangement convergence, diverse intron content, and genetic code modifications in mitochondrial genomes of Sphaeropleales (Chlorophyta). Genome Biology and Evolution 6 (8):2170-2180 |
| Publication: | Krienitz, L. et al. (2001) TRADITIONAL GENERIC CONCEPTS VERSUS 18S rRNA GENE PHYLOGENY IN THE GREEN ALGAL FAMILY SELENASTRACEAE (CHLOROPHYCEAE, CHLOROPHYTA). J. Phycol. 37 (5):852-865 |
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| SEQUENCE INFORMATION |
| Sequencing Project: | PRJNA259445 Kirchneriella aperta genome reference project |
| Sequence Accession: | NC_029676 Kirchneriella aperta strain SAG 2004 chloroplast, complete genome. (207516 bp) |
| Sequence Accession: | KT199250 Kirchneriella aperta strain SAG 2004 chloroplast, complete genome. (207516 bp) |
| Sequence Accession: | NC_024759 Kirchneriella aperta strain SAG 2004 mitochondrion, complete genome. (52927 bp) |
| Sequence Accession: | KJ806269 Kirchneriella aperta strain SAG 2004 mitochondrion, complete genome. (52927 bp) |
| Sequence Accession: | AJ271859 18S rRNA gene (3367 bp) |
| Sequence Accession: | KC145522 Kirchneriella aperta strain SAG 2004 elongation factor tu (tufA) gene, partial cds. (473 bp) |
| Sequence Accession: | KC145514 Kirchneriella aperta strain SAG 2004 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (1276 bp) |
| Sequence Accession: | KC145497 Kirchneriella aperta strain SAG 2004 photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast. (1052 bp) |
| Sequence Accession: | KC145481 Kirchneriella aperta strain SAG 2004 P700 chlorophyll a apoprotein A2 (psaB) gene, partial cds. (1773 bp) |
| Sequence Accession: | KC145464 Kirchneriella aperta strain SAG 2004 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence. (652 bp) |
| Sequence Accession: | KC145445 Kirchneriella aperta strain SAG 2004 28S ribosomal RNA gene, partial sequence. (2312 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | no |
