| SAG Strain Number: | 2036 |
| TAXONOMY |
| Genus: | Symbiochloris |
| Species: | irregularis |
| Taxonomic position: | Chlorophyta - Trebouxiophyceae |
| Authority: | (Tak.Nakano et Isagi) Skaloud, Friedl, A.Beck et Dal Grande comb. nov. |
| Variety: | |
| Formerly called: | Dictyochloropsis irregularis Nakano et Isagi |
| Authentic: | yes |
| Division: | Chlorophyta |
| Class: | Trebouxiophyceae |
| ORIGIN |
| General habitat: | subaerial |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Austria |
| Locality: | Styria, from green cover of aerophytic algae on the bark of Picea abies at the western exposed border of a forest at Obdacher Sattel (950 m a.s.l.) |
| Lat. / Long. (Precision): | 47.050037 / 14.717002 (1500m) View on Google Maps |
| Year: | September 1991 |
| Isolated by: | E. Tschermak-Woess |
| Strain number by isolator: | TW2000 |
| Deposition by: | |
| Deposition date: | |
| CULTURE INFORMATION |
| Culture medium: | ESP Ag |
| Axenic: | axenic |
| Strain relatives: | |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; assigned as authentic strain of Symbiochloris irregularis (Tak.Nakano et Isagi) Skaloud, Friedl, A.Beck et Dal Grande comb. nov. acc. to Skaloud et al. 2016 |
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| PUBLICATIONS |
| Publication: | Puginier C. et al. (2024) Phylogenomics reveals the evolutionary origins of lichenization in chlorophyte algae. Nat. Comm. 15 (1):4452 |
| Publication: | Puginier C. et al. (2022) Phylogenomics reveals the evolutionary origin of lichenization in chlorophyte algae. bioRxiv |
| Publication: | Skaloud, P. et al. (2016) Taxonomic revision and species delimitation of coccoid green algae currently assigned to the genus Dictyochloropsis (Trebouxiophyceae, Chlorophyta). J Phycol 52 (4):599-617 |
| Publication: | Steudel B. et al. (2016) Contrasting biodiversity-ecosystem functioning relationships in phylogenetic and functional diversity. New Phytologist 212 (2 ): 409-420 |
| Publication: | Procházková, Katerina et al. (2015) Morphology and phylogeny of parasitic and free-living members of the genus Phyllosiphon (Trebouxiophyceae, Chlorophyta). Nova Hedwigia 101 (3):501-518 |
| Publication: | Dal Grande F. et al. (2014) Molecular phylogeny and symbiotic selectivity of the green algal genus Dictyochloropsis s.l. (Trebouxiophyceae): a polyphyletic and widespread group forming photobiont-mediated guilds in the lichen family Lobariaceae. New Phytologist 202 (2):455-470 |
| Publication: | Del Campo, E.M. et al. (2013) Evolutionary implications of intron-exon distribution and the properties and sequences of the RPL10A gene in eukaryotes. Mol. Phylogenet. Evol. 66 (3):857-867 |
| Publication: | Fulnečková J. et al. (2013) A Broad Phylogenetic Survey Unveils the Diversity and Evolution of Telomeres in Eukaryotes. Genome Biology and Evolution 5 (3):468-483 |
| Publication: | Steudel B. et al. (2012) Biodiversity effects on ecosystem functioning change along environmental stress gradients. Ecology Letters 15 (12):1397–1405 |
| Publication: | del Campo E.M. et al. (2010) A single primer pair gives a specific ortholog amplicon in a wide range of Cyanobacteria and plastid-bearing organisms: applicability in inventory of reference material from collections and phylogenetic analysis. Mol. Phylogenet. Evol. 57 (3):1323-1328 |
| Publication: | Widmer, I. et al. (2010) Highly variable microsatellite markers for the fungal and algal symbionts of the lichen Lobaria pulmonaria and challenges in developing biont-specific molecular markers for fungal associations. Fungal Biol. 114 (7):538-544 |
| Publication: | Tschermak-Woess, E. (2000) Dictyochloropsis irregularis (Chlorococcales, Chlorophyta) new to Europe and the peculiar opening of its sporangia. Pl. Syst. Evol. 225:241-244 |
| Publication: | Ettl, H. et al. (1982) Was versteht man unter dem Begriff «coccale Grünalgen»? (Systematische Bemerkungen zu den Grünalgen II) [How to understand the conception «coccoid green algae»? (Systematical remarks to the green algae II)] p. 345-374,. Algological Studies/Archiv für Hydrobiologie, Suppl. Vol. 29:345-374 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | JALJOQ010000000 Symbiochloris irregularis strain SAG 2036, whole genome shotgun sequencing project (0 bp) |
| Sequence Accession: | HQ260628 Symbiochloris irregularis strain SAG 2036 D1 protein (psbA) gene, partial cds; chloroplast. (588 bp) |
| Sequence Accession: | JX179065 Symbiochloris irregularis strain SAG 2036 60S ribosomal protein L10a (RPL10A) gene, partial cds. (715 bp) |
| Sequence Accession: | JF502553 Symbiochloris irregularis strain SAG 2036 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (773 bp) |
| Sequence Accession: | JQ921010 Dictyochloropsis irregularis strain SAG 2036 23S large subunit ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease gene, complete cds; chloroplast. (2867 bp) |
| Sequence Accession: | KC333475 Symbiochloris irregularis strain SAG 2036 18S ribosomal RNA gene, partial sequence. (941 bp) |
| Sequence Accession: | KC333600 Symbiochloris irregularis strain SAG 2036 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (694 bp) |
| Sequence Accession: | KC333522 Symbiochloris irregularis strain SAG 2036 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence. (584 bp) |
| Sequence Accession: | GQ921937 Symbiochloris irregularis strain SAG 2036 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast. (652 bp) |
| Sequence Accession: | GU017659 Symbiochloris irregularis strain SAG 2036 from Austria 18S ribosomal RNA gene, partial sequence. (1779 bp) |
| Sequence Accession: | KR154345 Symbiochloris irregularis from Austria ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (1229 bp) |
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| CRYO |
| Cryopreservation: | medium survival |
| TEACHING |
| Recommended for teaching: | no |
