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SAG 2150 Symbiochloris handae

SAG Strain Number:2150
TAXONOMY
Genus:Symbiochloris
Species:handae
Taxonomic position:Chlorophyta - Trebouxiophyceae
Authority:Skaloud, Friedl, A.Beck et Dal Grande sp. nov.
Variety:
Formerly called:non-authentic strain of Dictyochloropsis reticulata (Tschermak-Woess) Tschermak-Woess
Authentic:yes
Division:Chlorophyta
Class:Trebouxiophyceae
ORIGIN
General habitat:phycobiont
Climatic zone:
Continent:Asia
Country:Japan
Locality:western Honshu, Hiroshima Prefecture, Mt. Garyu, phycobiont of lichen Brigantiea ferruginea (Müll. Arg) Kashiw. & Kurok.
Lat. / Long.  (Precision):34.488448 / 132.43309  (40000m)   View on Google Maps
Year:before 1991
Isolated by:S. Takeshita
Strain number by isolator:CCHU 5616
Deposition by:T. Friedl < S. Takeshita
Deposition date:09.2006
CULTURE INFORMATION
Culture medium:3NBBM+V Ag
Axenic:maybe axenic
Strain relatives:CCHU 5616; CAUP H8606
Agitation resistance:not detected
Special properties:
 
PUBLICATIONS
Publication:Skaloud, P. et al. (2016) Taxonomic revision and species delimitation of coccoid green algae currently assigned to the genus Dictyochloropsis (Trebouxiophyceae, Chlorophyta). J Phycol 52 (4):599-617
Publication:Dal Grande F. et al. (2014) Molecular phylogeny and symbiotic selectivity of the green algal genus Dictyochloropsis s.l. (Trebouxiophyceae): a polyphyletic and widespread group forming photobiont-mediated guilds in the lichen family Lobariaceae. New Phytologist 202 (2):455-470
Publication:Lemieux C. et al. (2014) Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae. BMC Evol. Biol. 14:211
Publication:Widmer, I. et al. (2010) Highly variable microsatellite markers for the fungal and algal symbionts of the lichen Lobaria pulmonaria and challenges in developing biont-specific molecular markers for fungal associations. Fungal Biol. 114 (7):538-544
Publication:Friedl, T. (1995) INFERRING TAXONOMIC POSITIONS AND TESTING GENUS LEVEL ASSIGNMENTS IN COCCOID GREEN LICHEN ALGAE: A PHYLOGENETIC ANALYSIS OF 18S RIBOSOMAL RNA SEQUENCES FROM DICTYOCHLOROPSIS RETICULATA AND FROM MEMBERS OF THE GENUS MYRMECIA (CHLOROPHYTA, TREBOUXIOPHYCEAE CL. NOV.). J. Phycol. 31 (4):489 - 674
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SEQUENCE INFORMATION
Sequencing Project:PRJNA267292  Dictyochloropsis reticulata culture-collection SAG:2150 chloroplast, complete genome.
Sequence Accession:KC333476  Dictyochloropsis reticulata strain CCHU 5616 18S rRNA gene, partial sequence (942 bp)
Sequence Accession:KC333590  Dictyochloropsis reticulata strain CCHU 5616 rbcL gene, partial cds; chloroplast (694 bp)
Sequence Accession:KC333524  Dictyochloropsis reticulata strain CCHU 5616 ITS 1, partial sequence; 5.8S rRNA gene and ITS 2, complete sequence; and 28S rRNA gene, partial sequence (682 bp)
Sequence Accession:KM462860  Dictyochloropsis reticulata culture-collection SAG:2150 chloroplast, complete genome. (289394 bp)
Sequence Accession:Z47207  gene for 18S ribosomal RNA (small subunit) (1744 bp)
CRYO
Cryopreservation:not detected
TEACHING
Recommended for teaching:no