| SAG Strain Number: | 2150 |
| TAXONOMY |
| Genus: | Symbiochloris |
| Species: | handae |
| Taxonomic position: | Chlorophyta - Trebouxiophyceae |
| Authority: | Skaloud, Friedl, A.Beck et Dal Grande sp. nov. |
| Variety: | |
| Formerly called: | non-authentic strain of Dictyochloropsis reticulata (Tschermak-Woess) Tschermak-Woess |
| Authentic: | yes |
| Division: | Chlorophyta |
| Class: | Trebouxiophyceae |
| ORIGIN |
| General habitat: | phycobiont |
| Climatic zone: | |
| Continent: | Asia |
| Country: | Japan |
| Locality: | western Honshu, Hiroshima Prefecture, Mt. Garyu, phycobiont of lichen Brigantiea ferruginea (Müll. Arg) Kashiw. & Kurok. |
| Lat. / Long. (Precision): | 34.488448 / 132.43309 (40000m) View on Google Maps |
| Year: | before 1991 |
| Isolated by: | S. Takeshita |
| Strain number by isolator: | CCHU 5616 |
| Deposition by: | T. Friedl < S. Takeshita |
| Deposition date: | 09.2006 |
| CULTURE INFORMATION |
| Culture medium: | 3NBBM+V Ag |
| Axenic: | maybe axenic |
| Strain relatives: | CCHU 5616; CAUP H8606 |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Skaloud, P. et al. (2016) Taxonomic revision and species delimitation of coccoid green algae currently assigned to the genus Dictyochloropsis (Trebouxiophyceae, Chlorophyta). J Phycol 52 (4):599-617 |
| Publication: | Dal Grande F. et al. (2015) Genomic DNA Extraction and Genotyping of Dictyochloropsis Green Algae Strains. Bio-protocol 5 (15):e1545 |
| Publication: | Dal Grande F. et al. (2014) Molecular phylogeny and symbiotic selectivity of the green algal genus Dictyochloropsis s.l. (Trebouxiophyceae): a polyphyletic and widespread group forming photobiont-mediated guilds in the lichen family Lobariaceae. New Phytologist 202 (2):455-470 |
| Publication: | Lemieux C. et al. (2014) Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae. BMC Evol. Biol. 14:211 |
| Publication: | Widmer, I. et al. (2010) Highly variable microsatellite markers for the fungal and algal symbionts of the lichen Lobaria pulmonaria and challenges in developing biont-specific molecular markers for fungal associations. Fungal Biol. 114 (7):538-544 |
| Publication: | Friedl, T. (1995) INFERRING TAXONOMIC POSITIONS AND TESTING GENUS LEVEL ASSIGNMENTS IN COCCOID GREEN LICHEN ALGAE: A PHYLOGENETIC ANALYSIS OF 18S RIBOSOMAL RNA SEQUENCES FROM DICTYOCHLOROPSIS RETICULATA AND FROM MEMBERS OF THE GENUS MYRMECIA (CHLOROPHYTA, TREBOUXIOPHYCEAE CL. NOV.). J. Phycol. 31 (4):489 - 674 |
| Publication: | Takeshita S., Handa S., Nakano T., Iwatsuki Z. (1991) Phycobionts of Brigantiaea ferruginea (Lichens). J. Jpn. Bot. 66 (3):147-151 |
| show more publications ... |
| SEQUENCE INFORMATION |
| Sequencing Project: | PRJNA267292 Dictyochloropsis reticulata culture-collection SAG:2150 chloroplast, complete genome. |
| Sequence Accession: | KC333476 Dictyochloropsis reticulata strain CCHU 5616 18S rRNA gene, partial sequence (942 bp) |
| Sequence Accession: | KC333590 Dictyochloropsis reticulata strain CCHU 5616 rbcL gene, partial cds; chloroplast (694 bp) |
| Sequence Accession: | KC333524 Dictyochloropsis reticulata strain CCHU 5616 ITS 1, partial sequence; 5.8S rRNA gene and ITS 2, complete sequence; and 28S rRNA gene, partial sequence (682 bp) |
| Sequence Accession: | KM462860 Dictyochloropsis reticulata culture-collection SAG:2150 chloroplast, complete genome. (289394 bp) |
| Sequence Accession: | Z47207 gene for 18S ribosomal RNA (small subunit) (1744 bp) |
| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | no |
