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SAG 216-11a Coccomyxa solorinae-croceae

SAG Strain Number:216-11a
TAXONOMY
Genus:Coccomyxa
Species:solorinae-croceae
Taxonomic position:Chlorophyta - Trebouxiophyceae
Authority:Chodat
Variety:
Formerly called:
Authentic:yes
Division:Chlorophyta
Class:Trebouxiophyceae
ORIGIN
General habitat:phycobiont
Climatic zone:
Continent:Europe
Country:Switzerland
Locality:Großer St. Bernhard, phycobiont of lichen Solorina crocea
Lat. / Long.  (Precision):45.95103 / 7.208891  (30000m)   View on Google Maps
Year:before 1913
Isolated by:R. Chodat
Strain number by isolator:85, Jaag No. 188: strain 1
Deposition by:
Deposition date:
CULTURE INFORMATION
Culture medium:ESP Ag
Axenic:axenic
Strain relatives:Coll. O. Jaag 188; CCAP 216/11A; UTEX 276
Agitation resistance:not detected
Special properties:
 
PUBLICATIONS
Publication:Steudel, Bastian et al. (2016) Contrasting biodiversity-ecosystem functioning relationships in phylogenetic and functional diversity. New Phytologist
Publication:Darienko, T. et al. (2015) Evaluating the Species Boundaries of Green Microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) Using Integrative Taxonomy and DNA Barcoding with Further Implications for the Species Identification in Environmental Samples. PLOS One 10 (6):e0127838
Publication:Del Campo, E.M. et al. (2013) Evolutionary implications of intron-exon distribution and the properties and sequences of the RPL10A gene in eukaryotes. Mol. Phylogenet. Evol. 66 (3):857-867
Publication:Steudel B. et al. (2012) Biodiversity effects on ecosystem functioning change along environmental stress gradients. Ecology Letters 15 (12):1397–1405
Publication:Lang, I. et al. (2011) Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection. BMC Plant Biol 11:124
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SEQUENCE INFORMATION
Sequence Accession:JX179059  Coccomyxa simplex strain SAG 216-11a 60S ribosomal protein L10a (RPL10A) gene, partial cds.  (622 bp)
Sequence Accession:JF502546  Coccomyxa simplex strain SAG 216-11a ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast.  (773 bp)
Sequence Accession:KU598845  Coccomyxa simplex strain SAG 216-11a 23S ribosomal RNA (rrl) gene, partial sequence; and putative LAGLIDADG homing endonuclease gene, complete cds; chloroplast. (1856 bp)
Sequence Accession:HG972983  Coccomyxa simplex genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain SAG 216-11a. (2447 bp)
Sequence Accession:KF673360  Coccomyxa solorinae-croceae strain SAG 216-11a 18S ribosomal RNA gene, complete sequence. (1704 bp)
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CRYO
Cryopreservation:good survival
TEACHING
Recommended for teaching:no