| SAG Strain Number: | 216-12 |
| TAXONOMY |
| Genus: | Coccomyxa |
| Species: | solorinae-saccatae |
| Taxonomic position: | Chlorophyta - Trebouxiophyceae |
| Authority: | Chodat |
| Variety: | |
| Formerly called: | |
| Authentic: | yes |
| Division: | Chlorophyta |
| Class: | Trebouxiophyceae |
| ORIGIN |
| General habitat: | phycobiont |
| Climatic zone: | |
| Continent: | Europe |
| Country: | Switzerland |
| Locality: | Großer St. Bernhard, phycobiont of lichen Solorina saccata |
| Lat. / Long. (Precision): | 45.95103 / 7.208891 (30000m) View on Google Maps |
| Year: | before 1909 |
| Isolated by: | R. Chodat |
| Strain number by isolator: | No. 75, Jaag No. 189 |
| Deposition by: | |
| Deposition date: | |
| CULTURE INFORMATION |
| Culture medium: | ESP Ag |
| Axenic: | axenic |
| Strain relatives: | Coll. O. Jaag 189; CCAP 216/12; UTEX 277 |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | González-Hourcade M. et al. (2021) The Under-explored Extracellular Proteome of Aero-Terrestrial Microalgae Provides Clues on Different Mechanisms of Desiccation Tolerance in Non-Model Organisms. Microb. Ecol. 81:437-453 |
| Publication: | Vingiani G.M. et al. (2021) Physiological and Molecular Alterations of Phycobionts of Genus Trebouxia and Coccomyxa Exposed to Cadmium. Microb. Ecol. 82:334-343 |
| Publication: | González-Hourcade M. et al. (2020) Ultrastructural and biochemical analyses reveal cell wall remodelling in lichen-forming microalgae submitted to cyclic desiccation–rehydration. Annals of Botany 125 (3):459-469 |
| Publication: | González-Hourcade M. et al. (2020) Disentangling the role of extracellular polysaccharides in desiccation tolerance in lichen-forming microalgae. First evidence of sulfated polysaccharides and ancient sulfotransferase genes. Environ. Microbiol. 22 (8):3096-3111 |
| Publication: | Centeno, D. C. et al. (2016) Contrasting strategies used by lichen microalgae to cope with desiccation-rehydration stress revealed by metabolite profiling and cell wall analysis. Environ Microbiol 18 (5):1546-60 |
| Publication: | Marasco, A. et al. (2016) Weathering of a Roman Mosaic-A Biological and Quantitative Study on In Vitro Colonization of Calcareous Tesserae by Phototrophic Microorganisms. PLOS One 11 (10):e0164487 |
| Publication: | Steudel B. et al. (2016) Contrasting biodiversity-ecosystem functioning relationships in phylogenetic and functional diversity. New Phytologist 212 (2 ): 409-420 |
| Publication: | Darienko T. et al. (2015) Evaluating the Species Boundaries of Green Microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) Using Integrative Taxonomy and DNA Barcoding with Further Implications for the Species Identification in Environmental Samples. PLOS One 10 (6):e0127838 |
| Publication: | Del Campo, E.M. et al. (2013) Evolutionary implications of intron-exon distribution and the properties and sequences of the RPL10A gene in eukaryotes. Mol. Phylogenet. Evol. 66 (3):857-867 |
| Publication: | Steudel B. et al. (2012) Biodiversity effects on ecosystem functioning change along environmental stress gradients. Ecology Letters 15 (12):1397–1405 |
| Publication: | del Campo E.M. et al. (2010) A single primer pair gives a specific ortholog amplicon in a wide range of Cyanobacteria and plastid-bearing organisms: applicability in inventory of reference material from collections and phylogenetic analysis. Mol. Phylogenet. Evol. 57 (3):1323-1328 |
| Publication: | Chodat, R. (1913) Monographies d'algues en culture pure. Materiaux pour la flore cryptogamique Suisse. Berne. 4:1-266 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | JX179060 Coccomyxa simplex strain SAG 216-12 60S ribosomal protein L10a (RPL10A) gene, partial cds. (622 bp) |
| Sequence Accession: | JF502547 Coccomyxa simplex strain SAG 216-12 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (773 bp) |
| Sequence Accession: | GQ921936 Coccomyxa simplex 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; and ORF369 (rrnL), ORF147 (rrnL), ORF165 (rrnL), ORF230 (rrnL), ORF215 (rrnL), ORF198 (rrnL), and ORF236 (rrnL) genes, complete cds; chloroplast. (10789 bp) |
| Sequence Accession: | HG972987 Coccomyxa simplex genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain SAG 216-12. (2447 bp) |
| Sequence Accession: | KF673386 Coccomyxa solorinae-saccatae strain SAG 216-12 18S ribosomal RNA gene, complete sequence. (1709 bp) |
| Sequence Accession: | AY293967 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence. (651 bp) |
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| CRYO |
| Cryopreservation: | medium survival |
| TEACHING |
| Recommended for teaching: | no |
