| SAG Strain Number: | 216-2 |
| TAXONOMY |
| Genus: | Coccomyxa |
| Species: | chodatii |
| Taxonomic position: | Chlorophyta - Trebouxiophyceae |
| Authority: | Jaag |
| Variety: | |
| Formerly called: | |
| Authentic: | yes |
| Division: | Chlorophyta |
| Class: | Trebouxiophyceae |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | |
| Continent: | Europe |
| Country: | Switzerland |
| Locality: | Lake Geneva |
| Lat. / Long. (Precision): | 46.404723 / 6.524277 (50000m) View on Google Maps |
| Year: | before 1909 |
| Isolated by: | R. Chodat |
| Strain number by isolator: | 10 as C. lacustris |
| Deposition by: | |
| Deposition date: | |
| CULTURE INFORMATION |
| Culture medium: | ESP Ag |
| Axenic: | axenic |
| Strain relatives: | Coll. O. Jaag 186; CCAP 216/2; UTEX 266 |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Rivasseau, C. et al. (2016) Coccomyxa actinabiotis sp. nov. (Trebouxiophyceae, Chlorophyta), a new green microalga living in the spent fuel cooling pool of a nuclear reactor. J. Phycol. 52 (5 ):689-703 |
| Publication: | Steudel B. et al. (2016) Contrasting biodiversity-ecosystem functioning relationships in phylogenetic and functional diversity. New Phytologist 212 (2 ): 409-420 |
| Publication: | Darienko T. et al. (2015) Evaluating the Species Boundaries of Green Microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) Using Integrative Taxonomy and DNA Barcoding with Further Implications for the Species Identification in Environmental Samples. PLOS One 10 (6):e0127838 |
| Publication: | Bogen C. et al. (2013) Identification of Monoraphidium contortum as a promising species for liquid biofuel production. Bioresource Technology 133:622-626 |
| Publication: | Del Campo, E.M. et al. (2013) Evolutionary implications of intron-exon distribution and the properties and sequences of the RPL10A gene in eukaryotes. Mol. Phylogenet. Evol. 66 (3):857-867 |
| Publication: | Steudel B. et al. (2012) Biodiversity effects on ecosystem functioning change along environmental stress gradients. Ecology Letters 15 (12):1397–1405 |
| Publication: | Letsch, M. R. et al. (2009) ELLIPTOCHLORIS MARINA SP. NOV. (TREBOUXIOPHYCEAE, CHLOROPHYTA), SYMBIOTIC GREEN ALGA OF THE TEMPERATE PACIFIC SEA ANEMONES ANTHOPLEURA XANTHOGRAMMICA AND A. ELEGANTISSIMA (ANTHOZOA, CNIDARIA). J. Phycol. 45:1127-1135 |
| Publication: | Chodat, R. (1913) Monographies d'algues en culture pure. Materiaux pour la flore cryptogamique Suisse. Berne. 4:1-266 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | JQ278715 Coccomyxa simplex strain SAG 216-2 23S ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease genes, complete cds; chloroplast. (5450 bp) |
| Sequence Accession: | JX196849 Coccomyxa simplex strain SAG 216-2 ribosomal protein L10a (RPL10A) gene, partial cds. (630 bp) |
| Sequence Accession: | HG972989 Coccomyxa simplex genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain SAG 216-2. (2414 bp) |
| Sequence Accession: | FN597598 Coccomyxa chodatii genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 26S rRNA gene, culture collection SAG:216-2. (3013 bp) |
| Sequence Accession: | FJ648512 Coccomyxa chodatii strain SAG 216-2 18S ribosomal RNA gene, complete sequence. (1762 bp) |
| Sequence Accession: | AY293968 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence. (619 bp) |
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| CRYO |
| Cryopreservation: | good survival |
| TEACHING |
| Recommended for teaching: | no |
