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SAG 216-2 Coccomyxa chodatii

SAG Strain Number:216-2
TAXONOMY
Genus:Coccomyxa
Species:chodatii
Taxonomic position:Chlorophyta - Trebouxiophyceae
Authority:Jaag
Variety:
Formerly called:
Authentic:yes
Division:Chlorophyta
Class:Trebouxiophyceae
ORIGIN
General habitat:freshwater
Climatic zone:
Continent:Europe
Country:Switzerland
Locality:Lake Geneva
Lat. / Long.  (Precision):46.404723 / 6.524277  (50000m)   View on Google Maps
Year:before 1909
Isolated by:R. Chodat
Strain number by isolator:10 as C. lacustris
Deposition by:
Deposition date:
CULTURE INFORMATION
Culture medium:ESP Ag
Axenic:axenic
Strain relatives:Coll. O. Jaag 186; CCAP 216/2; UTEX 266
Agitation resistance:not detected
Special properties:NO known Nagoya Protocol restrictions for this strain
 
PUBLICATIONS
Publication:Rivasseau, C. et al. (2016) Coccomyxa actinabiotis sp. nov. (Trebouxiophyceae, Chlorophyta), a new green microalga living in the spent fuel cooling pool of a nuclear reactor. J. Phycol. 52 (5 ):689-703
Publication:Steudel B. et al. (2016) Contrasting biodiversity-ecosystem functioning relationships in phylogenetic and functional diversity. New Phytologist 212 (2 ): 409-420
Publication:Darienko T. et al. (2015) Evaluating the Species Boundaries of Green Microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) Using Integrative Taxonomy and DNA Barcoding with Further Implications for the Species Identification in Environmental Samples. PLOS One 10 (6):e0127838
Publication:Bogen C. et al. (2013) Identification of Monoraphidium contortum as a promising species for liquid biofuel production. Bioresource Technology 133:622-626
Publication:Del Campo, E.M. et al. (2013) Evolutionary implications of intron-exon distribution and the properties and sequences of the RPL10A gene in eukaryotes. Mol. Phylogenet. Evol. 66 (3):857-867
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SEQUENCE INFORMATION
Sequence Accession:JQ278715  Coccomyxa simplex strain SAG 216-2 23S ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease genes, complete cds; chloroplast.  (5450 bp)
Sequence Accession:JX196849  Coccomyxa simplex strain SAG 216-2 ribosomal protein L10a (RPL10A) gene, partial cds.  (630 bp)
Sequence Accession:HG972989  Coccomyxa simplex genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain SAG 216-2. (2414 bp)
Sequence Accession:FN597598  Coccomyxa chodatii genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 26S rRNA gene, culture collection SAG:216-2. (3013 bp)
Sequence Accession:FJ648512  Coccomyxa chodatii strain SAG 216-2 18S ribosomal RNA gene, complete sequence. (1762 bp)
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CRYO
Cryopreservation:good survival
TEACHING
Recommended for teaching:no