| SAG Strain Number: | 216-4 |
| TAXONOMY |
| Genus: | Coccomyxa |
| Species: | viridis |
| Taxonomic position: | Chlorophyta - Trebouxiophyceae |
| Authority: | Chodat 1913 |
| Variety: | |
| Formerly called: | authentic strain of Coccomyxa mucigena Jaag |
| Authentic: | no |
| Division: | Chlorophyta |
| Class: | Trebouxiophyceae |
| ORIGIN |
| General habitat: | phycobiont |
| Climatic zone: | |
| Continent: | Europe |
| Country: | Switzerland |
| Locality: | Wallis, Dent de Nendaz, 2000 m, phycobiont of lichen Peltigera aphtosa |
| Lat. / Long. (Precision): | 46.156262 / 7.29131 (500m) View on Google Maps |
| Year: | 1933 |
| Isolated by: | O. Jaag |
| Strain number by isolator: | 123 |
| Deposition by: | E.G. Pringsheim |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | ESP Ag |
| Axenic: | axenic |
| Strain relatives: | CCAP 216/4; UTEX 269 |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; reassigned from authentic strain of Coccomyxa mucigena Jaag to non-authentic strain of Coccomyxa viridis Chodat 1913 acc. to Darienko et al. 2015. SAG 08/2025 |
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| PUBLICATIONS |
| Publication: | Kraege, A. et al. (2024) High quality genome assembly and annotation (v1) of the eukaryotic terrestrial microalga Coccomyxa viridis SAG 216-4. Peer Community Journal, Section Genomics 4:e72 |
| Publication: | Hallmann, C. et al. (2016) Biodiversity of green algae covering artificial hard substrate surfaces in a suburban environment: A case study using molecular approaches. J. Phycol. 52 (5):732-744 |
| Publication: | Steudel B. et al. (2016) Contrasting biodiversity-ecosystem functioning relationships in phylogenetic and functional diversity. New Phytologist 212 (2 ): 409-420 |
| Publication: | Darienko T. et al. (2015) Evaluating the Species Boundaries of Green Microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) Using Integrative Taxonomy and DNA Barcoding with Further Implications for the Species Identification in Environmental Samples. PLOS One 10 (6):e0127838 |
| Publication: | Del Campo, E.M. et al. (2013) Evolutionary implications of intron-exon distribution and the properties and sequences of the RPL10A gene in eukaryotes. Mol. Phylogenet. Evol. 66 (3):857-867 |
| Publication: | Steudel B. et al. (2012) Biodiversity effects on ecosystem functioning change along environmental stress gradients. Ecology Letters 15 (12):1397–1405 |
| Publication: | Gustavs et al. (2011) POLYOL PATTERNS IN BIOFILM-FORMING AEROTERRESTRIAL GREEN ALGAE (TREBOUXIOPHYCEAE, CHLOROPHYTA). J. Phycol. 47:533-537 |
| Publication: | Cordeiro, Lucimara M. C. et al. (2010) O-Methylated mannogalactan from the microalga Coccomyxa mucigena, symbiotic partner of the lichenized fungus Peltigera aphthosa. Phytochemistry 71 (10):1162-1167 |
| Publication: | Letsch, M. R. et al. (2009) ELLIPTOCHLORIS MARINA SP. NOV. (TREBOUXIOPHYCEAE, CHLOROPHYTA), SYMBIOTIC GREEN ALGA OF THE TEMPERATE PACIFIC SEA ANEMONES ANTHOPLEURA XANTHOGRAMMICA AND A. ELEGANTISSIMA (ANTHOZOA, CNIDARIA). J. Phycol. 45:1127-1135 |
| Publication: | Jaag, O. (1933) Coccomyxa Schmidle. Monographie einer Algengattung. Beitr. Kryptogamenflora der Schweiz 8:132p. |
| show more publications ... |
| SEQUENCE INFORMATION |
| Sequencing Project: | PRJNA1072845 Coccomyxa viridis Raw sequence reads |
| Sequencing Project: | PRJEB70312 High quality genome assembly and annotation (v1) of the eukaryotic terrestrial microalga Coccomyxa viridis SAG 216-4 |
| Sequence Accession: | JQ278712 Coccomyxa viridis strain SAG 216-4 23S ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease gene, complete cds; chloroplast. (2838 bp) |
| Sequence Accession: | JX196850 Coccomyxa viridis strain SAG 216-4 ribosomal protein L10a (RPL10A) gene, partial cds. (646 bp) |
| Sequence Accession: | HG973001 Coccomyxa viridis genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain SAG 216-4. (2526 bp) |
| Sequence Accession: | FJ648513 Coccomyxa mucigena strain SAG 216-4 18S ribosomal RNA gene, complete sequence. (1761 bp) |
| CRYO |
| Cryopreservation: | good survival |
| TEACHING |
| Recommended for teaching: | no |
