| SAG Strain Number: | 216-7 |
| TAXONOMY |
| Genus: | Coccomyxa |
| Species: | pringsheimii (botrydinae) |
| Taxonomic position: | Chlorophyta - Trebouxiophyceae |
| Authority: | Jaag |
| Variety: | |
| Formerly called: | |
| Authentic: | yes |
| Division: | Chlorophyta |
| Class: | Trebouxiophyceae |
| ORIGIN |
| General habitat: | phycobiont |
| Climatic zone: | |
| Continent: | Europe |
| Country: | Finland |
| Locality: | phycobiont of lichen Botrydina vulgaris |
| Lat. / Long. (Precision): | |
| Year: | before 1938 |
| Isolated by: | E. G. Pringsheim |
| Strain number by isolator: | as Coccomyxa pringsheimii (botrydinae) |
| Deposition by: | E. G. Pringsheim (SAG < CCAP) |
| Deposition date: | 1954 |
| CULTURE INFORMATION |
| Culture medium: | ESP Ag |
| Axenic: | axenic |
| Strain relatives: | Coll. O. Jaag 202; CCAP 216/7 |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; OneKP Sample ID: GXBM |
| |
| PUBLICATIONS |
| Publication: | Dorrell R.G. et al. (2023) Presence of vitamin B12 metabolism in the last common ancestor of land plants. bioRxiv :2023.06.07.544158 |
| Publication: | Puginier C. et al. (2022) Phylogenomics reveals the evolutionary origin of lichenization in chlorophyte algae. bioRxiv |
| Publication: | Goh F.Q.Y. et al. (2019) Gains and losses of metabolic function inferred from a phylotranscriptomic analysis of algae. Sci. Rep. 9:10482 |
| Publication: | Steudel B. et al. (2016) Contrasting biodiversity-ecosystem functioning relationships in phylogenetic and functional diversity. New Phytologist 212 (2 ): 409-420 |
| Publication: | Darienko T. et al. (2015) Evaluating the Species Boundaries of Green Microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) Using Integrative Taxonomy and DNA Barcoding with Further Implications for the Species Identification in Environmental Samples. PLOS One 10 (6):e0127838 |
| Publication: | Del Campo, E.M. et al. (2013) Evolutionary implications of intron-exon distribution and the properties and sequences of the RPL10A gene in eukaryotes. Mol. Phylogenet. Evol. 66 (3):857-867 |
| Publication: | Steudel B. et al. (2012) Biodiversity effects on ecosystem functioning change along environmental stress gradients. Ecology Letters 15 (12):1397–1405 |
| Publication: | Lapaille et al. (2010) Atypical Subunit Composition of the Chlorophycean Mitochondrial F1FO-ATP Synthase and Role of Asa7 Protein in Stability and Oligomycin Resistance of the Enzyme. 27 (7):1630-1644 |
| Publication: | Jaag, O. (1933) Coccomyxa Schmidle. Monographie einer Algengattung. Beitr. Kryptogamenflora der Schweiz 8:132p. |
| show more publications ... |
| SEQUENCE INFORMATION |
| Sequence Accession: | JALJOT010000000 Coccomyxa subellipsoidea strain SAG 216-7, whole genome shotgun sequencing project (0 bp) |
| Sequence Accession: | JQ278713 Coccomyxa subellipsoidea strain SAG 216-7 23S ribosomal RNA gene, partial sequence; chloroplast. (2253 bp) |
| Sequence Accession: | JX179056 Coccomyxa subellipsoidea strain SAG 216-7 60S ribosomal protein L10a (RPL10A) gene, partial cds. (604 bp) |
| Sequence Accession: | JF502548 Coccomyxa subellipsoidea strain SAG 216-7 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (773 bp) |
| Sequence Accession: | HG972976 Coccomyxa subellipsoidea genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain SAG 216-7. (3208 bp) |
| Sequence Accession: | KF673358 Coccomyxa pringsheimii strain SAG 216-7 18S ribosomal RNA gene, complete sequence. (2110 bp) |
| Sequence Accession: | ERS1830079 1000 Plants (1kP) RNA-Seq Transcriptome Sample ID: GXBM (0 bp) |
| show more sequences ... |
| CRYO |
| Cryopreservation: | good survival |
| TEACHING |
| Recommended for teaching: | no |
