| SAG Strain Number: | 219-1a |
| TAXONOMY |
| Genus: | Trebouxia |
| Species: | arboricola |
| Taxonomic position: | Chlorophyta - Trebouxiophyceae |
| Authority: | de Puymaly |
| Variety: | |
| Formerly called: | after Gärtner (1985) |
| Authentic: | yes |
| Division: | Chlorophyta |
| Class: | Trebouxiophyceae |
| ORIGIN |
| General habitat: | phycobiont |
| Climatic zone: | |
| Continent: | |
| Country: | |
| Locality: | |
| Lat. / Long. (Precision): | |
| Year: | before 1956 |
| Isolated by: | A. J. Kluyver ? |
| Strain number by isolator: | as Cystococcus humicola |
| Deposition by: | A. J. Kluyver (Cult. Coll. Delft) |
| Deposition date: | |
| CULTURE INFORMATION |
| Culture medium: | ESP Ag |
| Axenic: | axenic |
| Strain relatives: | CCAP 219/1A [dec.?] |
| Agitation resistance: | yes |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; OneKP Sample ID: NKXU |
| |
| PUBLICATIONS |
| Publication: | Puginier C. et al. (2024) Phylogenomics reveals the evolutionary origins of lichenization in chlorophyte algae. Nat. Comm. 15 (1):4452 |
| Publication: | Goh F.Q.Y. et al. (2019) Gains and losses of metabolic function inferred from a phylotranscriptomic analysis of algae. Sci. Rep. 9:10482 |
| Publication: | Hotter, V. et al. (2018) Polyols and UV‐sunscreens in the Prasiola‐clade (Trebouxiophyceae, Chlorophyta) as metabolites for stress response and chemotaxonomy. J. Phycol. 54 (2):264-274 |
| Publication: | Míguez, Fátima et al. (2017) Unraveling the Photoprotective Response of Lichenized and Free-Living Green Algae (Trebouxiophyceae, Chlorophyta) to Photochilling Stress. Frontiers in Plant Science 8 |
| Publication: | Hallmann, C. et al. (2016) Biodiversity of green algae covering artificial hard substrate surfaces in a suburban environment: A case study using molecular approaches. J. Phycol. 52 (5):732-744 |
| Publication: | Nyati, Shyam et al. (2014) Green-algal photobiont diversity (Trebouxia spp.) in representatives of Teloschistaceae (Lecanoromycetes, lichen-forming ascomycetes). The Lichenologist 46 (02):189-212 |
| Publication: | Hauck M. et al. (2007) Photobiont selectivity in the epiphytic lichens Hypogymnia physodes and Lecanora conizaeoides. The Lichenologist 39 (2):195-204 |
| Publication: | Simon, D. et al. (2003) Phylogeny and self-splicing ability of the plastid tRNA-Leu group I Intron. J. Mol. Evol. 57 (6):710-720 |
| Publication: | Beck, A. (2002) Selektivität der Symbionten schwermetalltoleranter Flechten. |
| Publication: | Beck, A. et al. (1998) Selectivity of photobiont choice in a defined lichen community: inferences from cultural and molecular studies. New Phytologist 139 (4):709-720 |
| Publication: | Friedl T. et al. (1997) Species relationships in the lichen alga Trebouxia (Chlorophyta, Trebouxiophyceae): Molecular phylogenetic analyses of nuclear encoded large subunit rRNA-gene sequences. Symbiosis 23 (2):125-148 |
| Publication: | Bhattacharya,D. et al. (1996) Nuclear-encoded rDNA group I introns: origin and phylogenetic relationships of insertion site lineages in the green algae. Mol. Biol. Evol. 13 (7):978-989 |
| Publication: | Friedl, T. (1989) Comparative ultrastructure of pyrenoids in Trebouxia ( Microthamniales, Chlorophyta). Pl. Syst. Evol. 164 (1-4):145-159 |
| Publication: | Archibald P.A. (1975) Trebouxia de Pulmaly (Chlorophyceae, Chlorococcales) and Pseudotrebouxia gen. nov. (Chlorophyceae, Chlorosarcinales). REMARK: Worked with CCAP 219/1A. Phycologia 14 (3):125-137 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | FJ804760 Trebouxia arboricola strain SAG 219-1A large subunit ribosomal RNA gene, partial sequence; and hypothetical protein genes, complete cds; chloroplast. (4473 bp) |
| Sequence Accession: | Z68705 5.8S, 18S and 26S rRNA genes. (3261 bp) |
| Sequence Accession: | Z95381 T.arboricola 26S rRNA gene. (1331 bp) |
| Sequence Accession: | AM158960 Trebouxia arboricola chloroplast partial rbcL gene for ribulose bisphosphate corboxylase/monooxygenase large subunit, strain SAG 219-Ia. (1325 bp) |
| Sequence Accession: | FJ626725 Trebouxia arboricola strain SAG 219-1A internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence. (664 bp) |
| Sequence Accession: | ERS1830126 1000 Plants (1kP) RNA-Seq Transcriptome Sample ID: NKXU (0 bp) |
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| CRYO |
| Cryopreservation: | low survival, standard 2-step protocol 5% DMSO |
| TEACHING |
| Recommended for teaching: | yes |
