| SAG Strain Number: | 30.93 |
| TAXONOMY |
| Genus: | Chlorococcum |
| Species: | oleofaciens |
| Taxonomic position: | Chlorophyta - Chlorophyceae |
| Authority: | Trainor et Bold |
| Variety: | |
| Formerly called: | Pleurastrum insigne Chodat |
| Authentic: | no |
| Division: | Chlorophyta |
| Class: | Chlorophyceae |
| Common name: | Green Algae - Chlorophytes |
| ORIGIN |
| General habitat: | soil |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Germany |
| Locality: | Hessen, Biebergemuend/Spessart, soil from banks of brooklet Kahlquelle (?) strain maybe mistaken/ mixed before deposition at SAG |
| Lat. / Long. (Precision): | 50.121551 / 9.316722 (100m) View on Google Maps |
| Year: | October 1985 (?) |
| Isolated by: | H.J. Sluiman |
| Strain number by isolator: | CS 5-6 (?) |
| Deposition by: | T. Friedl |
| Deposition date: | 10.1993 |
| CULTURE INFORMATION |
| Culture medium: | K Ag |
| Axenic: | axenic |
| Strain relatives: | |
| Agitation resistance: | yes |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; OneKP Sample ID: PRIQ; renamed from Pleurastrum insigne Chodat into Chlorococcum oleofaciens Trainor & H.C. Bold acc. to molecular data and Kawasaki et al. 2015, probably mistake already on deposition at SAG acc. to Kawasaki (SAG 06/2016) |
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| PUBLICATIONS |
| Publication: | Puginier C. et al. (2024) Phylogenomics reveals the evolutionary origins of lichenization in chlorophyte algae. Nat. Comm. 15 (1):4452 |
| Publication: | Vences M. et al. (2024) Phylotranscriptomic relationships of the Oophila clade of green algae associated to amphibian egg masses. Mol. Phylogen. Evol. 200:108165 |
| Publication: | Goh F.Q.Y. et al. (2019) Gains and losses of metabolic function inferred from a phylotranscriptomic analysis of algae. Sci. Rep. 9:10482 |
| Publication: | Feng, J. et al. (2016) Identification and characterization of a symbiotic alga from soil bryophyte for lipid profiles. Biol Open 5 (9):1317-23 |
| Publication: | Kawasaki, Y. et al. (2015) Taxonomic revision of oil-producing green algae, Chlorococcum oleofaciens (Volvocales, Chlorophyceae), and its relatives. J Phycol 51 (5):1000-16 |
| Publication: | Bogen C. et al. (2013) Identification of Monoraphidium contortum as a promising species for liquid biofuel production. Bioresource Technology 133:622-626 |
| Publication: | Buchheim, M.A. et al. (2013) The blood alga: phylogeny of Haematococcus (Chlorophyceae) inferred from ribosomal RNA gene sequence data. Eur. J. Phycol. 48 (3):318-329 |
| Publication: | Friedl, T. (1996) Evolution of the polyphyletic genus Pleurastrum (Chlorophyta): inferences from nuclear-encoded ribosomal DNA sequences and motile cell ultrastructure. Phycologia 35 (5):456-469 |
| Publication: | Friedl, T. et al. (1994) Assessing the relationships of some coccoid green lichen algae and the Microthamniales (Chlorophyta) with 18S ribosomal RNA gene sequence comparisons. J. Phycol. 30 (3):500-506 |
| Publication: | Sluiman, H.J. et al. (1990) Taxonomic studies on the genus Pleurastrum (Pleuastrales, Chlorophyta). I. The type species P. insigne, rediscovered and isolated from soil. Phycologia 29:133-138 |
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| SEQUENCE INFORMATION |
| Sequencing Project: | ERR2041095 Illumina HiSeq 2000 paired end sequencing |
| Sequence Accession: | LT594568 Pleurastrum insigne genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, strain SAG 30.93. (692 bp) |
| Sequence Accession: | LT594537 Pleurastrum insigne chloroplast partial tufA gene for elongation factor Tu, strain SAG 30.93. (828 bp) |
| Sequence Accession: | KX782324 Pleurastrum insigne isolate SAG 30.93 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequ (676 bp) |
| Sequence Accession: | KX782320 Pleurastrum insigne ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (676 bp) |
| Sequence Accession: | AB983632 Chlorococcum oleofaciens genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 26S rRNA, partial and complete sequence, strain: SAG 30.93. (645 bp) |
| Sequence Accession: | AB983614 Chlorococcum oleofaciens gene for 18S rRNA, partial sequence, strain: SAG 30.93. (1744 bp) |
| Sequence Accession: | Z28972 mRNA for nuclear encoded small subunit ribosomal RNA (1788 bp) |
| Sequence Accession: | EF113529 Pleurastrum insigne strain SAG 30.93 AtpB (atpB) gene, partial cds; chloroplast. (1168 bp) |
| Sequence Accession: | EF113464 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds (1001 bp) |
| Sequence Accession: | ERS1830157 1000 Plants (1kP) RNA-Seq Transcriptome Sample ID: PRIQ, was Pleurastrum insigne (see doi: 10.1111/jpy.12343) (0 bp) |
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| CRYO |
| Cryopreservation: | good survival |
| TEACHING |
| Recommended for teaching: | no |
