| SAG Strain Number: | 34.98 |
| TAXONOMY |
| Genus: | Chlorokybus |
| Species: | cerffii |
| Taxonomic position: | Streptophyta - Chlorokybophyceae |
| Authority: | Irisarri, Darienko, Pröschold, Fürst-Jansen, Jamy et J.de Vries |
| Variety: | |
| Formerly called: | Chlorokybus atmophyticus Geitler |
| Authentic: | yes |
| Division: | Streptophyta |
| Class: | Chlorokybophyceae |
| ORIGIN |
| General habitat: | subaerial |
| Climatic zone: | tropic |
| Continent: | America |
| Country: | Costa Rica |
| Locality: | Barreal/Heredia Suelo cafetal, soil |
| Lat. / Long. (Precision): | 10.033693 / -84.137314 (50m) View on Google Maps |
| Year: | 1984 |
| Isolated by: | U. Wydrzycka |
| Strain number by isolator: | GC-28 |
| Deposition by: | U. Wydrzycka |
| Deposition date: | 07.1998 |
| CULTURE INFORMATION |
| Culture medium: | ES Ag |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | |
| Agitation resistance: | yes |
| Special properties: | strain SAG 34.98 renamed from non-authentic strain of Chlorokybus atmophyticus Geitler into authentic strain of C. cerffii sp. nov. acc. to Irisarri et al. 2021. SAG 03/2022 |
| |
| PUBLICATIONS |
| Publication: | Schmidt V. et al. (2024) Phytohormone profiling in an evolutionary framework. Nat. Comm. 15:3875 |
| Publication: | Irisarri I. et al. (2021) Unexpected cryptic species among streptophyte algae most distant to land plants. Proc. R. Soc. B: Biol. 288:20212168 |
| Publication: | de Vries J et al. (2018) Embryophyte stress signaling evolved in the algal progenitors of land plants. PNAS 115 (15):E3471-E3480 |
| Publication: | Marin, B. et al. (1999) Mesostigmatophyceae, a New Class of Streptophyte Green Algae Revealed by SSU rRNA Sequence Comparisons. Protist 150:399-417 |
| SEQUENCE INFORMATION |
| Sequencing Project: | SAMN07525888 BioSample: SAMN07525888; Sample name: Chlorokybus Control 50 micro mol photons m-2 s-1 and 20 degrees Celsius; SRA: SRS2443000 |
| Sequence Accession: | MW696195 Chlorokybus cerffii strain SAG 34.98 SSU rRNA gene, partial sequence; ITS 1 5.8S rRNA gene, complete sequence; and ITS 2, partial sequence (2415 bp) |
| Sequence Accession: | MW696191 Chlorokybus cerffii strain SAG 34.98 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence. (2415 bp) |
| Sequence Accession: | DQ629182 Chlorokybus atmophyticus large subunit ribosomal RNA gene, partial sequence; chloroplast. (2479 bp) |
| Sequence Accession: | DQ647831 Chlorokybus atmophyticus large subunit ribosomal RNA gene, partial sequence; mitochondrial. (1696 bp) |
| Sequence Accession: | DQ646120 Chlorokybus atmophyticus ATPase alpha subunit (atp1) gene, partial cds; mitochondrial. (1073 bp) |
| Sequence Accession: | AY823715 Chlorokybus atmophyticus strain SAG 34.48 18S small subunit ribosomal RNA gene, partial sequence. (1722 bp) |
| Sequence Accession: | AY823706 Chlorokybus atmophyticus strain SAG 34.48 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (1353 bp) |
| Sequence Accession: | AY823689 Chlorokybus atmophyticus strain SAG 34.48 ATP synthase beta subunit (atpB) gene, partial cds; chloroplast. (1206 bp) |
| Sequence Accession: | AY823699 Chlorokybus atmophyticus strain SAG 34.48 NADH dehydrogenase subunit 5 (nad5) gene, partial cds; mitochondrial. (963 bp) |
| Sequence Accession: | KJ395825 Chlorokybus atmophyticus ATP synthase beta subunit (atpB) gene, partial cds; chloroplast. (1207 bp) |
| Sequence Accession: | KJ395894 Chlorokybus atmophyticus CP43 chlorophyll apoprotein of photosystem II (psbC) gene, partial cds; chloroplast. (1193 bp) |
| Sequence Accession: | DQ629495 Chlorokybus atmophyticus small subunit ribosomal RNA gene, partial sequence; chloroplast. (1368 bp) |
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| CRYO |
| Cryopreservation: | low survival |
| TEACHING |
| Recommended for teaching: | no |
