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SAG 42.84 Pedinomonas tuberculata

SAG Strain Number:42.84
TAXONOMY
Genus:Pedinomonas
Species:tuberculata
Taxonomic position:Chlorophyta - Chlorophyceae
Authority:(Vischer) Gams
Variety:
Formerly called:
Authentic:yes
Division:Chlorophyta
Class:Chlorophyceae
Common name:Green Algae - Chlorophytes
ORIGIN
General habitat:soil
Climatic zone:
Continent:Europe
Country:Switzerland
Locality:Unterengadin, Natl. Park Munt la Schera, soil from 2300 m
Lat. / Long.  (Precision):
Year:1945
Isolated by:W. Vischer
Strain number by isolator:274
Deposition by:E.G. Pringsheim ( < W. Vischer)
Deposition date:1954
CULTURE INFORMATION
Culture medium:MiEB12
Axenic:bacterial or other types of contamination
Strain relatives:CCAP 1965/2; UTEX 1539
Agitation resistance:yes
Special properties:recommended for food experiments
 
PUBLICATIONS
Publication:Lemieux C. et al. (2014) Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae. BMC Evol. Biol. 14:211
Publication:Marin, B. (2012) Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae (Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded rRNA operons. Protist 163 (5):778-805
Publication:Lang, I. et al. (2011) Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection. BMC Plant Biol 11:124
Publication:Schulze, D. et al. (1987) Immunolocalization of a Ca “-modulated contractile protein in the flagellar apparatus of green algae: the nucleus-basal body connector. Eur J Cell Biol 45:51-61
Publication:Vischer, W. (1949) Pedinomonas Korschikoff und eine neue Flagellatenklasse, Opisthokonta. Verhandl. Internat. Ver. Theoret. Angew. Limnol. 10:504-510
SEQUENCE INFORMATION
Sequencing Project:PRJNA267413  Pedinomonas tuberculata culture-collection SAG:42.84 chloroplast, complete genome.
Sequence Accession:KM462867  Pedinomonas tuberculata culture-collection SAG:42.84 chloroplast, complete genome. (126694 bp)
Sequence Accession:KM020064  Pedinomonas tuberculata strain SAG 42.84 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence. (2324 bp)
Sequence Accession:HE610134  Pedinomonas tuberculata 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 42.84. (5237 bp)
Sequence Accession:HE610168  Pedinomonas tuberculata plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 42.84. (2665 bp)
CRYO
Cryopreservation:no survival
TEACHING
Recommended for teaching:no