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SAG 48.80 Chlorokybus atmophyticus

SAG Strain Number:48.80
TAXONOMY
Genus:Chlorokybus
Species:atmophyticus
Taxonomic position:Streptophyta - Chlorokybophyceae
Authority:Geitler
Variety:
Formerly called:
Authentic:no
Division:Streptophyta
Class:Chlorokybophyceae
ORIGIN
General habitat:subaerial
Climatic zone:temperate
Continent:Europe
Country:Italy
Locality:Napoli, in enrichment culture of Porphyridium purpureum from the Mediterranean
Lat. / Long.  (Precision):
Year:1962
Isolated by:A. Rieth
Strain number by isolator:LI 818 SV
Deposition by:A. Rieth
Deposition date:03.1980
CULTURE INFORMATION
Culture medium:K Ag
Axenic:bacterial or other types of contamination
Strain relatives:CCAP 403/1; UTEX 2591
Agitation resistance:yes
Special properties:acc. to Rieth probably no contamination at his lab in Gatersleben (Germany), but a ontamination of the original Naples sample. Tolerates NACl concentrations up to 3% (Rieth 1972)
 
PUBLICATIONS
Publication:Lang, I. et al. (2011) Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection. BMC Plant Biol 11:124
Publication:Cocquyt, E. et al. (2009) Gain and loss of elongation factor genes in green algae. BMC Evol. Biol. 9 (39)
Publication:Lemieux C. et al. (2007) A clade uniting the green algae Mesostigma viride and Chlorokybus atmophyticus represents the deepest branch of the Streptophyta in chloroplast genome-based phylogenies. BMC Biol. 5 (2)
Publication:Turmel, M. et al. (2007) An unexpectedly large and loosely packed mitochondrial genome in the charophycean green alga Chlorokybus atmophyticus. BMC Genomics 8:137
Publication:Simon, D. et al. (2003) Phylogeny and self-splicing ability of the plastid tRNA-Leu group I Intron. J. Mol. Evol. 57 (6):710-720
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SEQUENCE INFORMATION
Sequencing Project:PRJNA20009  Chlorokybus atmophyticus mitochondrial genome
Sequence Accession:AF481838  Chlorokybus atmophyticus strain SAG 48.80 voucher SAG:48.80 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast.  (939 bp)
Sequence Accession:AY344772  Chlorokybus atmophyticus strain SAG 48.80 tRNA-Leu (trnL) gene, intron Group I; chloroplast.  (228 bp)
Sequence Accession:DQ270263  Chlorokybus atmophyticus strain SAG 48.80 glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds.  (1239 bp)
Sequence Accession:DQ270268  Chlorokybus atmophyticus strain SAG 48.80 glyceraldehyde-3-phosphate dehydrogenase subunit B (gapB) mRNA, complete cds.  (1444 bp)
Sequence Accession:EF463011  Chlorokybus atmophyticus strain SAG 48.80 mitochondrion, complete genome.  (201763 bp)
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CRYO
Cryopreservation:not detected
TEACHING
Recommended for teaching:no