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SAG 48.80 Chlorokybus riethii

SAG Strain Number:48.80
TAXONOMY
Genus:Chlorokybus
Species:riethii
Taxonomic position:Streptophyta - Chlorokybophyceae
Authority:Irisarri, Darienko, Pröschold, Fürst-Jansen, Jamy et J.de Vries
Variety:
Formerly called:Chlorokybus atmophyticus Geitler
Authentic:yes
Division:Streptophyta
Class:Chlorokybophyceae
ORIGIN
General habitat:subaerial
Climatic zone:temperate
Continent:Europe
Country:Italy
Locality:Napoli, in enrichment culture of Porphyridium purpureum from the Mediterranean
Lat. / Long.  (Precision):
Year:1962
Isolated by:A. Rieth
Strain number by isolator:LI 818 SV
Deposition by:A. Rieth
Deposition date:03.1980
CULTURE INFORMATION
Culture medium:K Ag
Axenic:bacterial or other types of contamination
Strain relatives:CCAP 403/1; UTEX 2591
Agitation resistance:yes
Special properties:NO known Nagoya Protocol restrictions for this strain; strain SAG 48.80 reassigned from non-authentic C. atmophyticus Geitler into authentic strain of Chlorokybus riethii Irisarri et al. sp. nov. acc. to Irisarri et al. 2021. SAG 03/2022; acc. to Rieth probably no contamination at his lab in Gatersleben (Germany), but a contamination of the original Naples sample. Tolerates NaCl concentrations up to 3% (Rieth 1972)
 
PUBLICATIONS
Publication:Irisarri I. et al. (2021) Unexpected cryptic species among streptophyte algae most distant to land plants. Proc. R. Soc. B: Biol. 288:20212168
Publication:Cocquyt, E. et al. (2010) Evolution and cytological diversification of the green seaweeds (Ulvophyceae). Mol Biol Evol 27 (9):2052-61
Publication:Cocquyt, E. et al. (2009) Gain and loss of elongation factor genes in green algae. BMC Evol. Biol. 9 (39)
Publication:Lemieux C. et al. (2007) A clade uniting the green algae Mesostigma viride and Chlorokybus atmophyticus represents the deepest branch of the Streptophyta in chloroplast genome-based phylogenies. BMC Biol. 5 (2)
Publication:Turmel M. et al. (2007) An unexpectedly large and loosely packed mitochondrial genome in the charophycean green alga Chlorokybus atmophyticus. BMC Genomics 8:137
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SEQUENCE INFORMATION
Sequencing Project:PRJNA20009  Chlorokybus atmophyticus mitochondrial genome
Sequencing Project:PRJNA18717   Chlorokybus atmophyticus chloroplast genome
Sequencing Project:SRX025846  Chlorokybus atmophyticus 454 sequencing parameters
Sequence Accession:MW696190  Chlorokybus riethii strain SAG 48.80 SSU rRNA gene, partial sequence; ITS 1 5.8S rRNA gene, complete sequence; and ITS 2, partial sequence (2415 bp)
Sequence Accession:AF481838  Chlorokybus atmophyticus strain SAG 48.80 voucher SAG:48.80 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast.  (939 bp)
Sequence Accession:AY344772  Chlorokybus atmophyticus strain SAG 48.80 tRNA-Leu (trnL) gene, intron Group I; chloroplast.  (228 bp)
Sequence Accession:DQ270263  Chlorokybus atmophyticus strain SAG 48.80 glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds.  (1239 bp)
Sequence Accession:DQ270268  Chlorokybus atmophyticus strain SAG 48.80 glyceraldehyde-3-phosphate dehydrogenase subunit B (gapB) mRNA, complete cds.  (1444 bp)
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CRYO
Cryopreservation:not detected
TEACHING
Recommended for teaching:no