| SAG Strain Number: | 48.88 |
| TAXONOMY |
| Genus: | Trebouxia |
| Species: | asymmetrica |
| Taxonomic position: | Chlorophyta - Trebouxiophyceae |
| Authority: | Friedl et Gärtner |
| Variety: | |
| Formerly called: | |
| Authentic: | yes |
| Division: | Chlorophyta |
| Class: | Trebouxiophyceae |
| ORIGIN |
| General habitat: | phycobiont |
| Climatic zone: | |
| Continent: | Europe |
| Country: | Spain |
| Locality: | Catalunya, Sa. de Roses, roadside at the street to El Port de la Selva, phycobiont of lichen Diploschistes albescens (sample no. E1201) |
| Lat. / Long. (Precision): | 42.29585 / 3.201427 (5000m) View on Google Maps |
| Year: | 1983? |
| Isolated by: | T. Friedl |
| Strain number by isolator: | UBT-83.002A1 |
| Deposition by: | T. Friedl |
| Deposition date: | 10.1988 |
| CULTURE INFORMATION |
| Culture medium: | ESP Ag |
| Axenic: | axenic |
| Strain relatives: | UTEX 2507 |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Hallmann, C. et al. (2016) Biodiversity of green algae covering artificial hard substrate surfaces in a suburban environment: A case study using molecular approaches. J. Phycol. 52 (5):732-744 |
| Publication: | Del Campo, E.M. et al. (2013) Evolutionary implications of intron-exon distribution and the properties and sequences of the RPL10A gene in eukaryotes. Mol. Phylogenet. Evol. 66 (3):857-867 |
| Publication: | Kvíderová J. et al. (2013) THE ICE NUCLEATION ACTIVITY OF EXTREMOPHILIC ALGAE . CryoLetters 34 (2):137-148 |
| Publication: | Kviderova, J. et al. (2013) THE ICE NUCLEATION ACTIVITY OF EXTREMOPHILIC ALGAE. CryoLetters 34 (2):137-148 |
| Publication: | del Campo E.M. et al. (2010) A single primer pair gives a specific ortholog amplicon in a wide range of Cyanobacteria and plastid-bearing organisms: applicability in inventory of reference material from collections and phylogenetic analysis. Mol. Phylogenet. Evol. 57 (3):1323-1328 |
| Publication: | Hauck M. et al. (2007) Photobiont selectivity in the epiphytic lichens Hypogymnia physodes and Lecanora conizaeoides. The Lichenologist 39 (2):195-204 |
| Publication: | Müller, J. et al. (2007) Assessing genetic stability of a range of terrestrial microalgae after cryopreservation using amplified fragment length polymorphism (AFLP). Am. J. Bot. 94 (5):799-808 |
| Publication: | Friedl, T. et al. (2000) The distribution of group I introns in lichen algae suggests that lichenization facilitates intron lateral transfer. Mol. Phylogenet. Evol. 14 (3):342-352 |
| Publication: | Friedl T. et al. (1997) Species relationships in the lichen alga Trebouxia (Chlorophyta, Trebouxiophyceae): Molecular phylogenetic analyses of nuclear encoded large subunit rRNA-gene sequences. Symbiosis 23 (2):125-148 |
| Publication: | Friedl, T. (1989) Comparative ultrastructure of pyrenoids in Trebouxia ( Microthamniales, Chlorophyta). Pl. Syst. Evol. 164 (1-4):145-159 |
| Publication: | Friedl T. et al. (1988) Trebouxia (Pleurastrales, Chlorophyta) as a phycobiont in the lichen genus Diploschistes. Arch. Protistenk 135:147-158 |
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| SEQUENCE INFORMATION |
| Sequence Accession: | AB194860 Trebouxia asymmetrica chloroplast rbcL gene for ribulose bisphosphate carboxylase large subunit, partial cds, strain: SAG 48.88. (1340 bp) |
| Sequence Accession: | JX179071 Trebouxia asymmetrica strain SAG 48.88 60S ribosomal protein L10a (RPL10A) gene, partial cds. (2431 bp) |
| Sequence Accession: | KU097339 Trebouxia asymmetrica photosystem II P680 chlorophyll A apoprotein (psbB) gene, partial cds; chloroplast. (1115 bp) |
| Sequence Accession: | Z21553 T.asymmetrica gene encoding 18S ribosomal RNA. (1796 bp) |
| Sequence Accession: | Z95380 T.asymmetrica 26S rRNA gene. (1330 bp) |
| Sequence Accession: | EU725860 Trebouxia asymmetrica strain SAG 48.88 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast. (1805 bp) |
| Sequence Accession: | AJ249565 partial 18S rRNA gene, 5.8S rRNA gene, ITS1 and I (759 bp) |
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| CRYO |
| Cryopreservation: | low survival, standard 2-step protocol 5% DMSO |
| TEACHING |
| Recommended for teaching: | no |
