| SAG Strain Number: | 48.90 |
| TAXONOMY |
| Genus: | Stigonema |
| Species: | ocellatum |
| Taxonomic position: | Cyanobacteria |
| Authority: | Thuret |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Cyanobacteria |
| Class: | Cyanophyceae |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | temperate |
| Continent: | Europe |
| Country: | Germany |
| Locality: | Allgäu, Sphagnum bog |
| Lat. / Long. (Precision): | 47.687579 / 10.215454 (100000m) View on Google Maps |
| Year: | 1970 |
| Isolated by: | D. Mollenhauer |
| Strain number by isolator: | 232 |
| Deposition by: | EAWAG, Zürich-Dübendorf |
| Deposition date: | 05.1988 |
| CULTURE INFORMATION |
| Culture medium: | Z 45/4 |
| Axenic: | bacterial or other types of contamination |
| Strain relatives: | IAM M-252; DSM 106950 |
| Agitation resistance: | not detected |
| Special properties: | NO known Nagoya Protocol restrictions for this strain |
| |
| PUBLICATIONS |
| Publication: | Marter P. et al. (2021) Filling the Gaps in the Cyanobacterial Tree of Life - Metagenome Analysis of Stigonema ocellatum DSM 106950, Chlorogloea purpurea SAG 13.99 and Gomphosphaeria aponina DSM 107014. Genes 12 (3):389 |
| Publication: | Gugger, M. F. et al. (2004) Polyphyly of true branching cyanobacteria (Stigonematales). Int. J. Syst. Evol. Microbiol. 54:349-357 |
| SEQUENCE INFORMATION |
| Sequencing Project: | PRJNA659938 Stigonema ocellatum SAG 48.90 = DSM 106950 isolate JP211, whole genome shotgun sequencing project |
| Sequence Accession: | KT832460 Stigonema ocellatum SAG 48.90 clone HAB04 NifH gene, partial cds. (349 bp) |
| Sequence Accession: | KT832459 Stigonema ocellatum SAG 48.90 clone HAB03 NifH gene, partial cds. (349 bp) |
| Sequence Accession: | KT832392 Stigonema ocellatum SAG 48.90 clone HAB02 C-phycocyanin beta subunit and C-phycocyanin alpha subunit genes, partial cds. (485 bp) |
| Sequence Accession: | KT832391 Stigonema ocellatum SAG 48.90 clone HAB01 C-phycocyanin beta subunit and C-phycocyanin alpha subunit genes, partial cds. (485 bp) |
| Sequence Accession: | AJ544082 partial 16S rRNA gene (1352 bp) |
| Sequence Accession: | JF827722 Stigonema ocellatum SAG 48.90 isolate DGGE gel band F dinitrogenase reductase (nifH) gene, partial cds. (255 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | yes |
