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SAG 575-1b Oedogonium cardiacum

SAG Strain Number:575-1b
TAXONOMY
Genus:Oedogonium
Species:cardiacum
Taxonomic position:Chlorophyta - Chlorophyceae
Authority:Wittrock
Variety:
Formerly called:
Authentic:no
Division:Chlorophyta
Class:Chlorophyceae
Common name:Green Algae - Chlorophytes
ORIGIN
General habitat:freshwater
Climatic zone:
Continent:Europe
Country:United Kingdom
Locality:
Lat. / Long.  (Precision):
Year:1949
Isolated by:T. Christensen
Strain number by isolator:
Deposition by:
Deposition date:
CULTURE INFORMATION
Culture medium:NH4E and WC
Axenic:bacterial or other types of contamination
Strain relatives:CCAP 575/1B; UTEX 40
Agitation resistance:not detected
Special properties:dioecious, female strain
 
PUBLICATIONS
Publication:Fucikova, K. et al. (2016) Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns of sequence evolution. Mol Phylogenet Evol 98:176-83
Publication:Hunsperger, H.M. et al. (2015) Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae. BMC Evol. Biol. 15 (16)
Publication:Fucikova, Karolina et al. (2014) New phylogenetic hypotheses for the core Chlorophyta based on chloroplast sequence data. Frontiers in Ecology and Evolution 2
Publication:Lang, I. et al. (2011) Fatty acid profiles and their distribution patterns in microalgae: a comprehensive analysis of more than 2000 strains from the SAG culture collection. BMC Plant Biol 11:124
Publication:Brouard, J.S. et al. (2008) Chloroplast DNA sequence of the green alga Oedogonium cardiacum (Chlorophyceae): unique genome architecture, derived characters shared with the Chaetophorales and novel genes acquired through horizontal transfer. BMC Genomics 9:290
SEQUENCE INFORMATION
Sequencing Project:PRJNA30587  Oedogonium cardiacum chloroplast, complete genome
Sequence Accession:EF587319  Oedogonium cardiacum strain SAG 575-1b ATP synthase CF1 beta subunit (atpB) gene, complete cds; chloroplast.  (1449 bp)
Sequence Accession:EF587320  Oedogonium cardiacum strain SAG 575-1b ATP synthase CF1 epsilon subunit (atpE) gene, complete cds; chloroplast.  (480 bp)
Sequence Accession:EF587321  Oedogonium cardiacum strain SAG 575-1b ATP synthase CF0 subunit I (atpF) gene, complete cds; chloroplast.  (534 bp)
Sequence Accession:EF587322  Oedogonium cardiacum strain SAG 575-1b ATP synthase CF0 subunit III (atpH) gene, complete cds; chloroplast.  (252 bp)
Sequence Accession:EF587323  Oedogonium cardiacum strain SAG 575-1b ATP synthase CF0 subunit IV (atpI) gene, complete cds; chloroplast.  (759 bp)
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CRYO
Cryopreservation:not detected
TEACHING
Recommended for teaching:no