| SAG Strain Number: | 880-1 |
| TAXONOMY |
| Genus: | Tribonema |
| Species: | aequale |
| Taxonomic position: | Heterokontophyta - Xanthophyceae |
| Authority: | Pascher |
| Variety: | |
| Formerly called: | |
| Authentic: | no |
| Division: | Heterokontophyta |
| Class: | Xanthophyceae |
| ORIGIN |
| General habitat: | freshwater |
| Climatic zone: | |
| Continent: | Europe |
| Country: | Slovakia |
| Locality: | mud from Pistyan |
| Lat. / Long. (Precision): | 48.591143 / 17.830696 (4000m) View on Google Maps |
| Year: | before 1972 |
| Isolated by: | E. G. Pringsheim |
| Strain number by isolator: | |
| Deposition by: | E.G. Pringsheim (SAG) |
| Deposition date: | before 1971 |
| CULTURE INFORMATION |
| Culture medium: | ESFl Ag |
| Axenic: | axenic |
| Strain relatives: | CCAP 880/1; UTEX 50; ATCC 30583 |
| Agitation resistance: | yes |
| Special properties: | NO known Nagoya Protocol restrictions for this strain; recommended for mass culture |
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| PUBLICATIONS |
| Publication: | Maistro, S. et al. (2009) Phylogeny and Taxonomy of Xanthophyceae (Stramenopiles, Chromalveolata). Protist 160 (3):412-426 |
| Publication: | Maistro, S. et al. (2007) Molecular phylogeny and evolution of the order Tribonematales (Heterokonta, Xanthophyceae) based on analysis of plastidial genes rbcL and psaA. Mol. Phylogenet. Evol. 43 (2):407-417 |
| Publication: | Zuccarello,G.C. et al. (2005) Molecular phylogeny of the genus Tribonema (Xanthophyceae) using rbcL gene sequence data: monophyly of morphologically simple algal species. Phycologia 44 (4):384-392 |
| Publication: | Simon, D. et al. (2003) Phylogeny and self-splicing ability of the plastid tRNA-Leu group I Intron. J. Mol. Evol. 57 (6):710-720 |
| Publication: | Van der Auwera, G. et al. (1997) Complete large subunit ribosomal RNA sequences from the heterokont algae Ochromonas danica, Nannochloropsis salina, and Tribonema aequale, and phylogenetic analysis. J. Mol. Evol. 45 (1):84-90 |
| SEQUENCE INFORMATION |
| Sequence Accession: | AY344788 Tribonema aequale strain SAG 880-1 tRNA-Leu (trnL) gene, intron Group I; chloroplast. (219 bp) |
| Sequence Accession: | AY682457 Tribonema affine clone T66 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast. (1349 bp) |
| Sequence Accession: | Y07978 5.8S rRNA gene and ITS1 and ITS2 DNA (229 bp) |
| Sequence Accession: | Y07979 28S rRNA gene and ITS2 DNA (3452 bp) |
| Sequence Accession: | AJ875169 plastid partial psaA gene (1494 bp) |
| Sequence Accession: | AM905298 Tribonema aequale mitochondrial partial nad7 gene for NADH dehydrogenase subunit 7, strain SAG 880-1. (975 bp) |
| Sequence Accession: | EF455969 complete rbcL sequence with adjacent spacer region (3039 bp) |
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| CRYO |
| Cryopreservation: | not detected |
| TEACHING |
| Recommended for teaching: | yes |
